Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0646 ATGCTTCACCATTTACACCGTCTTATATCACCTTTGTCCACATTGGTATCATCATTTGAAGCTCTTAATGTAAAGAGGTTTGACGTTGCTTTTACAGTGGATCCTCTTTATCATCAGACATCAGCCCAGTTTGATGGAGTGAAGGGTCTCCTACTGAATAATCTTGCTGTATATGGAGGATGTCGGGTGCTTTTTGATTCTTTGGAAGTACCAGGAAAGTGCATATTATGTTCAAGTGAAAATAATAGTTCAGATATGGTTGCTATATCTTTTGCCAAAGAATATATTGAGCAGATGGTGATGAACATGCTTGAAAAAAATGAAATTTCCCCCACTCTTAGGGATATCATGTGTCTGTTCAATGAAGAAAATCAACAGCCATCTCATACATTTAATGAAGCTGTAACTGATGATGGCTTCACTTTTGGAGATCCAACCATTCATAGTCATTATGAGGGGAATGATTCCTATACATCTTATGAACCTGATGTAGATGACAGGCTTGAGAATGTTGCTACATTTTTGTTTCAAGGGTTGGGATTTACCTCAAAGAAAAATGTCTGGGCAGGTACAGATCATTGGAAGTTTCAGAAGTGCAAGGGTTCAGAGGATGTTCCTACTGAAAGTGAGTCATCTTTCACAAAGAAGAGACCAAAGAACAAAAAAATTACAGAATTAGATATTAGTTTCACAAAATATTTGGTCAAAGAAGCGCCTGATGTCTTTGTCCCTCTCAAAAATCCAAAATTGCTGCTGCTACCTGCAAGTAGAGAACCTTGTCGTAACACACTTCCTGAAGATTGCCATTATCAACCTGAGGATCTTGTGAAGCTGTTTCTTCTTCCTAAAGTTATGTGCCTTGGGAAGAGAAGAAGACAACTTCCGGATGCTCAAGAACACAATGATGATGATCGGTTGCCATCATGGGATAATGGAAGTGTGTTTAATTGCCAGTATGATGATGGATATGCTGATAGTGATGTGGAAAACTTGGACATTCTGGTGTCTCAGCCTCGTCAGGTCAAAAAAATTGAAGTTCAGTATGATAAAACTTCTAAACAAATTGATGTACACATTTTGAAGAAAACACTTCAGGATCTCATGCAGGAATCCATTCAAATGTCTGAGGCGGTGTACAACAATGCCATATCTTTGAAGCATATATTGAGTACCTTTCCAGATGACTGCCCAGCTGCTAAATTACAGGATATATCTCCACATTTGTGTTTCATTTGCCTCTTGCATCTAGTCAATGAGCATTGTTTGAACATGCATGGCTGCCCCAATTTGGATGATCTTATCATGCAATTTCCCCTGTCATCTCAAAACACAGGTGATGTGATACTGTCATCATCATAG 1359 0.3863 MLHHLHRLISPLSTLVSSFEALNVKRFDVAFTVDPLYHQTSAQFDGVKGLLLNNLAVYGGCRVLFDSLEVPGKCILCSSENNSSDMVAISFAKEYIEQMVMNMLEKNEISPTLRDIMCLFNEENQQPSHTFNEAVTDDGFTFGDPTIHSHYEGNDSYTSYEPDVDDRLENVATFLFQGLGFTSKKNVWAGTDHWKFQKCKGSEDVPTESESSFTKKRPKNKKITELDISFTKYLVKEAPDVFVPLKNPKLLLLPASREPCRNTLPEDCHYQPEDLVKLFLLPKVMCLGKRRRQLPDAQEHNDDDRLPSWDNGSVFNCQYDDGYADSDVENLDILVSQPRQVKKIEVQYDKTSKQIDVHILKKTLQDLMQESIQMSEAVYNNAISLKHILSTFPDDCPAAKLQDISPHLCFICLLHLVNEHCLNMHGCPNLDDLIMQFPLSSQNTGDVILSSS* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0646 452 Pfam Condensin complex subunit 2 184 296 IPR022816 GO:0000796|GO:0007076
Vvi19g0646 452 Pfam Condensin complex subunit 2 322 434 IPR022816 GO:0000796|GO:0007076
Vvi19g0646 452 Pfam Condensin complex subunit 2 13 137 IPR022816 GO:0000796|GO:0007076
Vvi19g0646 452 PANTHER CONDENSIN COMPLEX SUBUNIT 2 159 436 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0646 Vvi-Chr19 7076144 7082843 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0646 K06676 - qsu:112013024 538.495