Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0644 ATGCATGGCCAAGGCGTGTCATCGAGTCCAGGAGCCTGCAAGGGTTTAAAGGTCGATGGGGAAGGAATCAAGGAGCTTTGTTCTGGCTGGAAGTTCATTATTCTGCTTACTCATTTTTGCTTTCCTTTATGTTTGGCTGATTTGAGTTTGTTTGGAGATGAAGGGAAGCACCATTTATGGAATTGGGGTAGAAGCTCTAGTCATGCTGCAGAGAAGATTGATAGAGACATGGAAGAGAGAGAACCACTGAGGTCCATTCTGAGAAGGCTAGTGAGAGGGGAAGATCGAGTCAAGCTTGAAGCCACTGGATTTTCTTGCTACTCAGATCTTCATTCAGAAGTCTGCGTCACCGATAAACCAGTTAGGATCAACAACCATACAGTTTACGTATTGTCTGATCAAAGTTCAGATGAATTTAAACAGAGTGTTCAGCCATATGCAAGGAAAGATGACGAAATCGCCATGAAGGCTTTTGTCATTACTGACGATAAGCCTTGGATGGTCGAAAGGTACAAGAGGATTCTGAAACAGTTGTCTGCATACAACGCTATAAACCCAGCAGAAGATGGAAGCGTGCACTGCTTCCCAGGGGCTGTTATCGGTCTCAAGTATCACGACAATCTGGCCCTCAATACCAGTGACATTCCTGGAGGCTACTCCATGAGTGACTTCAAGCATTTTCTCAGAAAATCATACAGCCTGAAGATTACAACTGCGTCTGAGATAGAACACCCTAAGCCTGTGCTGATTCTAATATCTCGTCGTACAACTAGGAAGTTCTTGAATGAAGATGAAACGGTGGGTTTGATGGAGGACCTAGGGTTTCAGGTGATCATAACACCGCCTTATAACATGTCAAGCTTGGACAAGTTTGCCCAGGTTGTGAACTCGTGTAGTGTGATGGTAGGAGCCCATGGTGCCGGCCTAGCAAACTCAGTATTGCTGCCTGCCGGAGCAGTGACGGTGCAGGTGGTGCCACTGGGGCTGGACAGGGCATCGGCAGCCAACTATGGAGACCCAGCTAGAAAGATAGGTGTGCAGTATTTGGAGTACAAGATTGAGGCAGAAGAGAGTTCCCTCTTTGATTTATATGGTCGGGATCAACCGATTATTGCCGATCCCCAATCCATACATTTGAAAGGCTATGATGTTGCTAGAGCTGTGTATCTGGACGGGCAGGATATGAAGATCAACCTAGTGAGGCTCAGGGAGATTCTGGTTCAAGCAAGAAAGCTTCTTGGAAACCCCACGTCATTCAAATGA 1263 0.4632 MHGQGVSSSPGACKGLKVDGEGIKELCSGWKFIILLTHFCFPLCLADLSLFGDEGKHHLWNWGRSSSHAAEKIDRDMEEREPLRSILRRLVRGEDRVKLEATGFSCYSDLHSEVCVTDKPVRINNHTVYVLSDQSSDEFKQSVQPYARKDDEIAMKAFVITDDKPWMVERYKRILKQLSAYNAINPAEDGSVHCFPGAVIGLKYHDNLALNTSDIPGGYSMSDFKHFLRKSYSLKITTASEIEHPKPVLILISRRTTRKFLNEDETVGLMEDLGFQVIITPPYNMSSLDKFAQVVNSCSVMVGAHGAGLANSVLLPAGAVTVQVVPLGLDRASAANYGDPARKIGVQYLEYKIEAEESSLFDLYGRDQPIIADPQSIHLKGYDVARAVYLDGQDMKINLVRLREILVQARKLLGNPTSFK* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0644 420 Pfam Glycosyltransferase 61 225 320 IPR007657 GO:0016757
Vvi19g0644 420 PANTHER GLYCOSYLTRANSFERASE 158 412 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0644 Vvi-Chr19 7059267 7061190 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0644 - - vvi:104877597 497.278