Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0640 ATGGCTGCTCCGGCCATGGAAGGCCTCGCCGTCACAGCTCTCCGGTCCGCTATGCTCCGTGTCCGTCAAGCGGCAGAGAGGTCCGGTCGCCGGTCCGATCAGGTCCGCGTTGTGGCTGTCTCAAAAACCAAACCAGTCTCTCTCATCCGGCAAGTCTACGACGCCGGTCACCGTTGTTTTGGCGAAAACTACGTTCAAGAGATAAACGAAAAAGCACCACAGCTTCCAGAGGACATTGAATGGCATTTTATTGGGCATTTGCAGAGCAATAAAGTGAAACCGCTTCTGGCTGCAGTCCCCAATCTTGCCATGGTTGAAGGTGTAGATAATGAGAAGATTGCAAATCAGCTTGATCGTGTGGTTTCAGGCATCAGAAGGAAGCCTTTGAAGGTTTTGGTTCAAGTGAATACTAGTGGAGAAGTATCAAAATCTGGAGTTGAGCCATCAGGTTGTGTGGAGCTAGCTAAACATGTTAAGCTAGGCTGCCCCAATCTCGAGTTTTCTGGTTTAATGACAATAGGGATGCCAGACTATTCATCAACTCCAGAGAACTTCAGGAGACTATTGAACTGTAGAATTGAGGTTTGTAAAGCTCTTGGAATGGCAGAGGAGCAGTGCGAGCTGTCAATGGGCATGTCTGGTGACTTTGAGCAAGCGATTGAAATGGGCAGCACCAATGTGAGAATTGGATCAACCATATTTGGACCAAGGGAGTATCCTAAGAAAGAACAGAATTAG 738 0.481 MAAPAMEGLAVTALRSAMLRVRQAAERSGRRSDQVRVVAVSKTKPVSLIRQVYDAGHRCFGENYVQEINEKAPQLPEDIEWHFIGHLQSNKVKPLLAAVPNLAMVEGVDNEKIANQLDRVVSGIRRKPLKVLVQVNTSGEVSKSGVEPSGCVELAKHVKLGCPNLEFSGLMTIGMPDYSSTPENFRRLLNCRIEVCKALGMAEEQCELSMGMSGDFEQAIEMGSTNVRIGSTIFGPREYPKKEQN* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0640 245 Hamap Pyridoxal phosphate homeostasis protein. 12 236 IPR011078 GO:0030170
Vvi19g0640 245 NCBIfam YggS family pyridoxal phosphate-dependent enzyme 21 237 IPR011078 GO:0030170
Vvi19g0640 245 CDD PLPDE_III_YBL036c_euk 14 235 - -
Vvi19g0640 245 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 5 243 IPR011078 GO:0030170
Vvi19g0640 245 FunFam Pyridoxal phosphate homeostasis protein 2 244 - -
Vvi19g0640 245 Pfam Alanine racemase, N-terminal domain 20 237 IPR001608 -
Vvi19g0640 245 Gene3D Alanine racemase 3 245 IPR029066 -
Vvi19g0640 245 PIRSF YBL036c_PLPDEIII 1 243 IPR011078 GO:0030170
Vvi19g0640 245 SUPERFAMILY PLP-binding barrel 14 235 IPR029066 -
Vvi19g0640 245 ProSitePatterns Uncharacterized protein family UPF0001 signature. 81 95 IPR011078 GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0640 Vvi-Chr19 6960177 6964683 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0640 K06997 - vvi:100255429 487.263