Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0639 ATGTACTCTTCTAATTGTCCTAAGCCACTACTCATCTTCCCAATATTGGCTACTCTCTGCCTCCTCTCCACCACCACCTCCACTGCCCAAGCCAGCACCCAATGCAGTGAGCAATTCGAATTGATGATCACCAATGGAAATGGAAGAAACAAGCCAAAATGCCAGAAGTTGACAACTCTAAAGGCTGAATTCGGTTGGACTATTCTTAAGAATAAGTCCATCGATATCTTCTTCGGCGCAAGGCTGGATAACGACGAGGGGTGGCTGGCCTGGGGTGTGAACCCTGGGAAGAGGCCACAGATGGTCGGGACAAGAGCCATCATAGGCATTAAGAACCCAAATGGGAGCCTAATGGTGAACACTTACAACATCACTAGTGGCACTAAGCTCGGCTGCCAGTTGCTTCCGTCCGAGCTTCATGATGATAATGATGTGTTGTTTAGTAACAGGAAAATCTTCATCAACCAAACAGAGCTCGTGGTAATATCTGCAACAGTAACTCTCCCTTCTGAATACAACATTACGGACCTCCATCATGTGTGGCAAGTTGGGGCTAAGGTCGATGGGAATGAGCCCAAGATGCACCCGACCACCCTCCAGAACGTTGATAGTACCGAGACCATAAACTTGAACACCGGGGAAGGCCACAGCGTCGGACAGCACCGGCGTCACCTAAGAACGGTTCATGGGATTCTGAACATTGTGGGGTGGGGGACTCTGCTACCCATGGGCGTGATCGTGGCGAGGTACTTCAGGAAATTTCCCTTTAAAAACACATACTGGTTCTTAGCTCATATCTACATACAAATTATTGGGTACACTCTGGGCACAATCGGGTGGGCCATTGGCCTGGTGCTGGGACACTCCTCTAGATACTACACCTTCCGCATTCATCGAATCCTCGCAATATTCATATTCACCTTCACAAGCTTACAAATGTTGGCGTTGAGATTGAAGCCAGAGACAAAGGATGAATATAGGAAGTACTGGGACATGTACCACCACTTCCTGGGGTACTCGCTTCTGGCCTTGATATCTGTAAATATATTTCAGGGGATTGCCATCTTGAAGCCTGACAAAACCTGGAAATGGGTGTACATTGGAGTGCTTGGGGCTTTGGCTTCCATCACTTTAGTCTTTGAGATCTGTACTTGGGTAAAATTCCTAAAGCAGAAGAAAAAGGACAAGGATGCCACCAAACAACAAGCTGGTGCACCAGGTGGCGGAGGAGCCCCTACTGGAGGAGGAGCCCCTACTGGCGGAGGAGCCCCTACTGGCGGAGGAGCTCCTACTGGCGGCGGAGGAGCTCCTACTGGCGGCGGAGGAGCTCCTACTGGCGGCGGAGGAGCTCCTGATGGAGGACCGCCTCTATAA 1374 0.5007 MYSSNCPKPLLIFPILATLCLLSTTTSTAQASTQCSEQFELMITNGNGRNKPKCQKLTTLKAEFGWTILKNKSIDIFFGARLDNDEGWLAWGVNPGKRPQMVGTRAIIGIKNPNGSLMVNTYNITSGTKLGCQLLPSELHDDNDVLFSNRKIFINQTELVVISATVTLPSEYNITDLHHVWQVGAKVDGNEPKMHPTTLQNVDSTETINLNTGEGHSVGQHRRHLRTVHGILNIVGWGTLLPMGVIVARYFRKFPFKNTYWFLAHIYIQIIGYTLGTIGWAIGLVLGHSSRYYTFRIHRILAIFIFTFTSLQMLALRLKPETKDEYRKYWDMYHHFLGYSLLALISVNIFQGIAILKPDKTWKWVYIGVLGALASITLVFEICTWVKFLKQKKKDKDATKQQAGAPGGGGAPTGGGAPTGGGAPTGGGAPTGGGGAPTGGGGAPTGGGGAPDGGPPL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0639 457 CDD DOMON_CIL1_like 52 212 IPR045265 -
Vvi19g0639 457 ProSiteProfiles Cytochrome b561 domain profile. 191 389 IPR006593 -
Vvi19g0639 457 SMART 561_7 228 353 IPR006593 -
Vvi19g0639 457 MobiDBLite consensus disorder prediction 396 457 - -
Vvi19g0639 457 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 19 399 - -
Vvi19g0639 457 Pfam Protein of unknown function (DUF568) 101 210 IPR045265 -
Vvi19g0639 457 Gene3D - 207 398 - -
Vvi19g0639 457 PIRSF UCP037471 10 408 IPR017214 -
Vvi19g0639 457 CDD Cyt_b561_FRRS1_like 203 382 - -
Vvi19g0639 457 ProSiteProfiles DOMON domain profile. 60 184 IPR005018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0639 Vvi-Chr19 6956978 6958495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0639 - - vvi:100265906 786.178