Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0634 ATGCAATTTTATGTTGCTAGGCTTCTGATGGACACATCTGTTTTACAATTTTATCCTACACTGTTTGTTCTAGCTACAGATGTAATGGATATGCTGGGGGATATGGTTTGGGAGCGCATCAAGCGGAAAGCTGAATTTGCCGAAGATGGAACCCCTATCTGCTCTTTATCAGAGAGCTTTGAGGCAAGCGATATTTGCCTCGATGCCAAAGAAACTTGCAACAACTGGTTCTGCAAAATTGGTTCCATTCGAGAGCTTCTTCCACGCATTTATTTAGAGCTAGCAATGTTGTCTTGCTGTCGTTTCTTGCATGACCAACCCATAAACAATCTCAATCGATTGGTTATGATGACTAGAGGTGTAGCAGATCCATTGGCATCTTCATATTGCCGTCTGTATATGGTGCATTGTGCACAGAAATTGCCCACATGTGATAGAGGATACCTGATATCTTGCATCAATGACATCAAAATTTTATTAATGAGGATGATATCAGAAAAAGAGGCCACACATGGAAATTCTTCAGCAAACAAAAGGTTGCTTGTCAGTTTGATGGAACCAACCATTGAATATATTATGAAATGCATATTTAAGGATGCATCTCAGAGGCAAGTGGGTGACATACTTGTGAAGCTTGGATTAGGGAGAAATGAATCAGAATTGTTTGGAAAATTCCCATTTGTTTCAATTATTCTCCATCATCTACTCAAGGAACTTCCAACTGAAGTAGTCAGTTCTAATGCTACAGAGATTCTTCATCTCATTGAGTCCTGCAATGACTATTCTTTTGATCAGTGTTTAAATTATAGGTTGCTTGGATTCAGACTGGGTGAAAGGGGATCTCAAATGGACATGATCAATGCCATTATTGATAAAGTTATTCAGGTTGTTGCCCAATTTAATTGTCTTGATGAATACCTGAAAGTGGTGGATTCTTATGTGGATATTGTTCTTCAAAATCAGATGGATAATTATCTGGATGCCATTTTGGAAGGTGTTTCAAAGCGAGCATGCAATAAAGAGATTGATGAAAGTGAACTGGGAAGCTTGCAATCCATTTTTTCAAAGCTTCTTGCTCATTTTAATAACTTAGAAGACATATTTGCTTTGAACCATTTTGTTGAGATCTTAGATGTAATGTACGGAAGCTCAAGGAACATCATCAATATGCAAATTCTCAATATTGCAACAAGGAATGGTTACATTCATGATCCAGCAACCATACAGTTACTTCTTGAAATCTCTCAGTCTCTTCATGATGGTATAGATTTGTTTAACATGAAGGATAATGATAATCAACAGCCAGCACGCCTAATATCTCGTTTTGTCCAAATGGTTGATTATGGGATAGAGATGGAACACCATTTAACATTTCTAGTTGAATGCCGTGGAGCTTTTAGTAACATAGAGGAACTTAAGGAAACGCTTGTTCACTCCTGCAATTGTTTAGCAATTAAAGCTATGAAAGAGGCCAAAAAACATATTAGTTTTGTCAAATCCTGCATAGCATTCAGTGAAGTTACAATACCTTCTATTTCAGCTTGTCCTAAGCAGTTGAACCTTTATCTGGAGACAGCAGAGGTTGCTCTGGTATGTGGTTTAGTTTCTCATTCAGATGGACTTATAGACTCAGCACTTGGATGTTTACAAACCTTAGACCTGATGGATGGTTTTCAAATACTGATTGATGTTGATGGAATTCTCTCCTTGATACGAAAATTGTGCAGCCTCTTGGTTATGGTTCCAGGCAATCCTGAGCAAGGAGCTGCCTTTATCCCAAAGAGCATATTATCCCTCGTTAGTTCCCAATCATGGATAACACCAAAAATGAGGGCAAGGATATTATGTGCAATTATTTCATTGTCAGCAACTTTATCCCAAAATAAGCTCCCATATAATGTTGATAATATAGAGATTCTGGGCAATGACCTATTGTTCTTTGGTGATTCAACCTATTTGCAAGATCTTGTTTCATTGTCTGAGTTTGTTCTAGAGGAACTGTGCAATGTCATCCAACAAGAGCCTTCACAGGCTGCTCGGGGAAGCATGGCGCTTGAAGCTTGCAACTGCATTGCATCATCTTTCAAAGTAAGCCCGGAAATATCACCTATCTGCTCCAAGCTGATGGAAACTGCCCAGCTCTGTTTGAGCTCCAACAACAAGTATCTGCAGTCAACCATGAAACTTTTAGGCGAACGTTTGCCATCATTCCCGGCAGCTCCATCAATAATCATCAGATAG 2241 0.3887 MQFYVARLLMDTSVLQFYPTLFVLATDVMDMLGDMVWERIKRKAEFAEDGTPICSLSESFEASDICLDAKETCNNWFCKIGSIRELLPRIYLELAMLSCCRFLHDQPINNLNRLVMMTRGVADPLASSYCRLYMVHCAQKLPTCDRGYLISCINDIKILLMRMISEKEATHGNSSANKRLLVSLMEPTIEYIMKCIFKDASQRQVGDILVKLGLGRNESELFGKFPFVSIILHHLLKELPTEVVSSNATEILHLIESCNDYSFDQCLNYRLLGFRLGERGSQMDMINAIIDKVIQVVAQFNCLDEYLKVVDSYVDIVLQNQMDNYLDAILEGVSKRACNKEIDESELGSLQSIFSKLLAHFNNLEDIFALNHFVEILDVMYGSSRNIINMQILNIATRNGYIHDPATIQLLLEISQSLHDGIDLFNMKDNDNQQPARLISRFVQMVDYGIEMEHHLTFLVECRGAFSNIEELKETLVHSCNCLAIKAMKEAKKHISFVKSCIAFSEVTIPSISACPKQLNLYLETAEVALVCGLVSHSDGLIDSALGCLQTLDLMDGFQILIDVDGILSLIRKLCSLLVMVPGNPEQGAAFIPKSILSLVSSQSWITPKMRARILCAIISLSATLSQNKLPYNVDNIEILGNDLLFFGDSTYLQDLVSLSEFVLEELCNVIQQEPSQAARGSMALEACNCIASSFKVSPEISPICSKLMETAQLCLSSNNKYLQSTMKLLGERLPSFPAAPSIIIR* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0634 746 PANTHER ESOPHAGEAL CANCER ASSOCIATED PROTEIN 5 732 IPR029705 GO:0032456
Vvi19g0634 746 Pfam Vacuolar protein sorting-associated protein 35 282 549 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0634 K25731 - vvi:100245313 1458.74