Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0631 ATGGGAACCAAATGTAGAACTGTTGCAGTTGCACTCTTCCTTTCAATCCTTATGTTTTCACCAGAATTTTCGGCCTCAGATGGTGGATTGGTTAGAATTGGACTCAAAAAGAGGGCTTTTGATCAAACCAACCGCCTAGCTGCACGGATAGAGTCCAAGCAAGGGGAGGCCTTGGGAACTTCAATTCGGAAGTATAATCTTCATGGGAATGCTGCGGGATCGAAACACACGTATGTTGTGGCACTACACAACTACATGGATGCTCAATATTTTGGGGAAATCAGTATTGGAACTCCCCCTCAAAAGTTCACTGTAATATTTGACACTGGCAGTTCTAATCTGTGGGTGCCCTCTTCTAAATGTTACTTTTCGGTTGCATGCTATTTCCACTCCAAGTACAAGTCAAGCCAATCAAGCACCTACAAAAAGAATGGGACATCAGCAGATATCCATTATGGAACTGGTGCTATTTCTGGTTTCTTCAGTAAAGACGATGTAAAAGTTGGTGACCTTGCAGTCATAAATCAGGAATTTATTGAGGCAACGAAAGAACCCAGCATCACATTTGCTTTGGCCAAGTTTGATGGCATACTTGGACTTGGGTTTCAAGAGATTTCAGTTGGAAATGCTGTGCCTGTGTGGTACAACATGATCAATCAAGAACTTATTAAAGAACCAATTTTCTCATTTTGGTTTAACCGAAACTCCAATGAAGAAGTAGGGGGTGAAATTGTATTTGGTGGTATTGATTCTGATCATTACAAGGGTAAGCACACCTATGTTCCTGTAACAAAGAAAGGCTATTGGCAGTTTGATCTGGGTGATGTCATGATTGGTGGTAAAACAACTGGATTTTGCGCTAGTGGCTGTTCAGCAATTGCTGATTCTGGAACCTCTCTGTTAGCTGGTCCAACAACAATTATTACTGAAGTCAATCATGCCATTGGAGCCTCTGGGTTTGTAAGCCAAGAATGCAGAGCAGTTGTCCAACAATATGGGCAAATAATAATTGACATGCTATTAACAAAGGAGCAACCTCAGAAAATCTGCTCACAAATTGGTTTGTGCGCTTTCAATGGTATTCGAGGTGTTAGTATGGGCATTGAGAGTGTCGTGGATGAGAACAATAGCAAGGCATCTGATGGTCTGCATGATACCATGTGCTCTGCCTGTTCAATGGCAGTTGTCTGGATACAAAATAAGCTTGGTCAGAATGAAACGATTGACCGTATATTAAAATACGTCAATGAGCTCTGTGATCGGCTGCCTAGTCCAATGGGAGAATCAGCAGTTGATTGTGGTAGTCTGTCTTCAATGCCTAATGTTTCGTTAACCATTGGTGGAAAAGTATTTGATCTCAGCCCCAAGCAGTACATCCTCAAAGTGGGTGAGGGAGAAATAGCTCAATGCATTAGTGGATTTACAGCTTTGGATGTGCCACCTCCTCATGGACCTCTCTGGATCCTGGGTGACGTTTTCATGGGTCAGTACCACACGGTATTTGATTACGGAAATATGAAAGTTGGATTCGCGGAAGCTGCATAA 1545 0.4239 MGTKCRTVAVALFLSILMFSPEFSASDGGLVRIGLKKRAFDQTNRLAARIESKQGEALGTSIRKYNLHGNAAGSKHTYVVALHNYMDAQYFGEISIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACYFHSKYKSSQSSTYKKNGTSADIHYGTGAISGFFSKDDVKVGDLAVINQEFIEATKEPSITFALAKFDGILGLGFQEISVGNAVPVWYNMINQELIKEPIFSFWFNRNSNEEVGGEIVFGGIDSDHYKGKHTYVPVTKKGYWQFDLGDVMIGGKTTGFCASGCSAIADSGTSLLAGPTTIITEVNHAIGASGFVSQECRAVVQQYGQIIIDMLLTKEQPQKICSQIGLCAFNGIRGVSMGIESVVDENNSKASDGLHDTMCSACSMAVVWIQNKLGQNETIDRILKYVNELCDRLPSPMGESAVDCGSLSSMPNVSLTIGGKVFDLSPKQYILKVGEGEIAQCISGFTALDVPPPHGPLWILGDVFMGQYHTVFDYGNMKVGFAEAA* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0631 514 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 20 512 IPR001461 GO:0004190|GO:0006508
Vvi19g0631 514 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 105 116 IPR001969 GO:0004190|GO:0006508
Vvi19g0631 514 SMART sapb_4 284 356 IPR008139 -
Vvi19g0631 514 SUPERFAMILY Saposin 321 423 IPR011001 -
Vvi19g0631 514 CDD phytepsin 80 512 IPR033869 GO:0004190
Vvi19g0631 514 PRINTS Pepsin (A1) aspartic protease family signature 292 303 IPR001461 GO:0004190|GO:0006508
Vvi19g0631 514 PRINTS Pepsin (A1) aspartic protease family signature 96 116 IPR001461 GO:0004190|GO:0006508
Vvi19g0631 514 PRINTS Pepsin (A1) aspartic protease family signature 242 255 IPR001461 GO:0004190|GO:0006508
Vvi19g0631 514 PRINTS Pepsin (A1) aspartic protease family signature 487 502 IPR001461 GO:0004190|GO:0006508
Vvi19g0631 514 FunFam Vacuolar aspartic proteinase 398 513 - -
Vvi19g0631 514 ProSiteProfiles Saposin B type domain profile. 320 360 IPR008139 -
Vvi19g0631 514 Pfam Saposin-like type B, region 1 387 423 IPR007856 GO:0006629
Vvi19g0631 514 Gene3D Acid Proteases 31 248 IPR021109 -
Vvi19g0631 514 Gene3D Acid Proteases 249 514 IPR021109 -
Vvi19g0631 514 Gene3D - 320 423 - -
Vvi19g0631 514 ProSiteProfiles Saposin B type domain profile. 384 425 IPR008139 -
Vvi19g0631 514 SUPERFAMILY Acid proteases 12 513 IPR021109 -
Vvi19g0631 514 Pfam Eukaryotic aspartyl protease 89 513 IPR033121 -
Vvi19g0631 514 ProSiteProfiles Peptidase family A1 domain profile. 90 511 IPR033121 -
Vvi19g0631 514 Pfam Saposin-like type B, region 2 323 356 IPR008138 -
Vvi19g0631 514 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 292 303 IPR001969 GO:0004190|GO:0006508
Vvi19g0631 514 FunFam Lysosomal aspartic protease 76 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0631 Vvi-Chr19 6871397 6877229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0631 K08245 - vvi:100267436 1023.85