Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0627 ATGGCAACCATTCAGTCATCATCTCTTCTTTTTTCTTCTTTTTCTTCTTCCTCTGCTTCAGATATTCCCAGAGACATCAGAGCAGCTGCCTCAAAATCCCGGGCAAGCCATCTTTCAGTTTTGAAACTTCCTTCTGGAAACTTGGTTCATGAACCGAGCAGGAAAAATGGCTTCCAAACCATAAATTCTGGAGAAATGAAGCCTCTTATTAGGACTAATATGAGAAATGATGAAGCAAACTGTAACTCAAAGGTGGTTGAGGAGCTTTACGCTATAATGGAAGCTGTTGCGGACAGATCAGAAATGCACAAAAATATTGGCGTGCAGCGCGATAATTGGAACCGTCTTCTCCTCAACTCTGTAAATGGGATGACAGTCACAGCTGCAACAATGGCTGGACTTGCATTTCTGAGTGGTGGGGGTGCAACACTTTTGGCCTTGAAGCTCTCTTCCACCCTACTCTACACAGCGGCTACTGGAATTTTGATGGTGATGAACAATATTCAGCCATCTCAGCTTGCAGAAGAGCAAAGGAATGCAGCTAGACTGTTTAAGAACCTTCACCAGCAAATCAAGACTGTTGTTGCAGTTGGAAGCCCCAGTTTGAATGATGTGAACGCTGCAATGGAGAAGGTGTTGGCGCTGGACAAGGCCTATCCCCTTCCCTTGCTAGGGACGATGCTCGAGAAGTTCCCAAAGACTGTGGAGCCTGCAGTGTGGTGGCCAAGAGAAGTGGGGTCTCAACATGAGAAGGTGAGTGGGGGGGTGGAGAGAAATGGGTGGAGTGAGAAGCTTGAGGAGGAGATGAGGGAGGTTGTTGGGGTGCTGAAGAGGAAGGATGCTGCAGAGTATGTGAGGCTAAGCAAACTAGTATTGAAAGTAAACAAAATTCTAGCCATATGTGGCCCTCTTTTCACTGGCATCGCCGCCATGGGATCGGCGATGGTGGGATCCTCACCTTGGAATGGGTCGTGGGCTGTGGTGTTGGGTGTGGTGTTTGGAGCTCTGGCCACAGTGGTAAACACACTGGAGCATGGTGGGCAGGTGGGTATGGTGTTTGAGATGTATAGAAGCACTGCCGGGTACTTTCAACTCATGGAAGAGACCATAGAATCAACTTTGAAGGAGAAAGAAGTAGGGGAAAGGGAAAATGGAGAATTATTTGAAGTGAAAGTGGCTCTTCAGCTTGGAAGGAGCCTTCCTGGGCTTCAAAACCTAGCCACCACTCATCCTCCTTCCCCTTCCAATGAATTTGCAAGCAAGCTCTTCTGA 1272 0.4772 MATIQSSSLLFSSFSSSSASDIPRDIRAAASKSRASHLSVLKLPSGNLVHEPSRKNGFQTINSGEMKPLIRTNMRNDEANCNSKVVEELYAIMEAVADRSEMHKNIGVQRDNWNRLLLNSVNGMTVTAATMAGLAFLSGGGATLLALKLSSTLLYTAATGILMVMNNIQPSQLAEEQRNAARLFKNLHQQIKTVVAVGSPSLNDVNAAMEKVLALDKAYPLPLLGTMLEKFPKTVEPAVWWPREVGSQHEKVSGGVERNGWSEKLEEEMREVVGVLKRKDAAEYVRLSKLVLKVNKILAICGPLFTGIAAMGSAMVGSSPWNGSWAVVLGVVFGALATVVNTLEHGGQVGMVFEMYRSTAGYFQLMEETIESTLKEKEVGERENGELFEVKVALQLGRSLPGLQNLATTHPPSPSNEFASKLF* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0627 423 Pfam Petal formation-expressed 89 403 IPR027949 -
Vvi19g0627 423 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 12 423 IPR027949 -
Vvi19g0627 423 MobiDBLite consensus disorder prediction 403 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0627 Vvi-Chr19 6831435 6832706 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0627 - - vvi:100252001 761.911