Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0622 ATGGCTTCTAAGTTTCTTCTTCTTATGCTTTTTAGTGCTCTTGTTTGCACCGCCACTGCTGCTAGGAGGCTTGTGAGCCAGAAGGGTTCTTCTGAGGATGAGAAAACGTTCTTTTTTGACCCCGGGTATGATGGAGGGCTAGGTGGTGGAGGTGGCGGCGGCTTTGGAGGAGGAGGTGGTGGTGGGTTGGATGGGGGGGCCGGCTTTGGTGGAGGTTCTGGATTTGGAGCAGGAGGTGGGCTTGGTGGAGGTGGCGGCGCCGGTGGCGGTGGAGGGTTCGGCGGCGGTGGTGGTGGAGGACTAGGTGGTGGGTCTGGGTTCGGTGGTGGGGCTGGAGCTGGTTTTGGAGGTGGGACTGGGGTAGGTGGGGGAGCCGGAGGAGGTGGCGGTGGAGGCTTCGGTGGTGGTGGAGGAGGCGGACTTGGTGGAGGAGCTGGTGGTGGACTTGGAGGTGGATTTCCTTGA 465 0.6108 MASKFLLLMLFSALVCTATAARRLVSQKGSSEDEKTFFFDPGYDGGLGGGGGGGFGGGGGGGLDGGAGFGGGSGFGAGGGLGGGGGAGGGGGFGGGGGGGLGGGSGFGGGAGAGFGGGTGVGGGAGGGGGGGFGGGGGGGLGGGAGGGLGGGFP* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0622 154 PRINTS Eggshell protein signature 91 106 - -
Vvi19g0622 154 PRINTS Eggshell protein signature 4 20 - -
Vvi19g0622 154 PRINTS Eggshell protein signature 116 126 - -
Vvi19g0622 154 PRINTS Eggshell protein signature 140 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0622 Vvi-Chr19 6798181 6798645 Singletons
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0622 - K19945 vvi:100258850 89.3521