LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi19g0619	ATGGAGGCGCCCTCCTTTGTCTCCAAAGCGAGGACGGCCCTCCATTCTGCGGCAGCGAAAGCGGAGCGAGTCATCACAGACATCAAATCCGATTTAAAAAGCGATCGAGATTCTGATAAGCAATCGTCGAATTCAAAAATATCCGAACCGGAATTGTCGAAGAAGAATGCCGAGACCAATCATGAACGGAAGCATACAAGGTGGAGATCTCCACAAAAAGTGACTAAGCAAGATTGGCATGACAGATTGAAGAATATCAGAATAGGGAAGAAAGGTGTTGACAACACTGAGAAATCTGATAATTCAACAATGTCCTTTCATATTTTTGATGAAAATTTGTACCCAAAGAGCCCAAAAAGTACTTCTGAAGCAAAGGGTTCGGATGTGTTTTCATTTGCAGAAGTTTCTAATGCCATTGACGTGAATAACATTCCTCCATCATCTGTCATTAAACAATTAGCTGTAGCCGTTGAGACCGGGAAGAAGTTTAAGTCAATGAAAGATCTTATGGTGTCATCCAGAGATTCTTCACCAGTCAGAGAGAGAGCAGGCTTGAGTCTTTCTGCAGTGAAGTCATTAGTGCTTCGTGAGGAAAAGCCTACATCTGAGTTTGGTGATAATGAGAAAGTTCTCTCTTTGATCCATTTGCTGCTTGATGCAGAGGGAGATTTTCTCAGAAGGAAGTTTGGCTCTGATGCGGAGACACTTGCTACCAAAATGTCTTTGCCTAGAGAAATTCATGCTGCTCCTCCTGAAAGCTTGGTCGTTAAGCTTTCTGAAGTCATTGGAAACTTCAAGACTCTGCGAAAAATGGCAATATTTTGGTGTGGGGTTGTCGCTGAACTGAGAAAACTTTGGTCTGAGGAGCAATATGTACCTGGCATCCCCCTGGATGAGATTCCAGATCTAAATTGTTGTCTTTTATATCAGCAGTTGCAGGTTATTAATTGTTGTATTTCCAGGAAAAGGCGCCATGTTATTGCCACTGAATCATTAGACTCTGTAATAAGAGAAGCTGGTTCAAACATCGAAGAGCCTTTTGTTTCCAAAGGTCTGGTTGATGAAAAATCTATTTTATATGCTAGAATTAGCACTGGGGAACTTGTCCTTCGATTGGGAGCTGGTCGCCCATCTGACAATTTAATGATGTTGGAAACTGGTGAACCAATCTATGTCCCTGTTACCCAGGAAGGACCTTTGCTTACAGAAGATCTTATAAAAGAAACAGAGGAGTTTGTTCTACGAACAGGGAGGCATTCTTTGACAATTTGTCTCATTTTTTCCCCTATGCTCAGTGTTGGTGCTGGATGTTCTCAACTACTTTCAGACATGCAGGCTTTCAAGGCTGCAAATCCTGGATCTATTTTAGAAGATTTTGTGAGATGGCATTCACCGCCTGATTGGACTGATACTGAGCCTAGTGATGAGTTTAAAGACACCTTTGATGGAGGTGATTCATTGTCTGCAAGAGGTCAACTCAGTAGTAGAATGCGCAAGGAAGGTAATTTGTGGTGTGAACTGTGGAAGACAGCCAAACCATTGCCAGCTGTTAAACAAGCACCCCTCTTTGATGAGGATTTGGCCGTGGAAGGTATTCTACATTTCCTAGACGACATCCCACCTTCTGAGCTTTTTAAACAACTGTTTGTTTCTTTACTTGGTTTGGGATTTGTAATTGCCGAGGCCACACTCTCCACAAATAGTAATTTGTCAAAGCTTTTTCATGAGTGCAAAGACTACACTATTGCTACTTGTCAAAGAGGCACCTGGATTGACAAAATTGATGATCTTTGCCAGGTGTATGAAACCGTGGAGATGATGCTGCTCCATCCAGAGGAAATATTAAAGATCATGAAGCAACCAGAAGAGGCGGCTGCCAATGCAGATGAACCAAAGCGTAGGTTTAGGAGGCTTGCTCAGATCTTTGGTGGTAAAGATAGACCAGCAAGAAAACCAGCATCAAAAGACCAAAATGTCTCTGAAGAGAACCCTATCCGGCAACCATTCTCTAATATGTTTGATGGCAGGTCATCTTTATTTTCGAAGAAGCCTCCTAAACCTGACAGCACAATTACTGCTGACAAACCTCCTCTAGAAGAAAACGATTGGACGATTGTATGA	2121	0.4224	MEAPSFVSKARTALHSAAAKAERVITDIKSDLKSDRDSDKQSSNSKISEPELSKKNAETNHERKHTRWRSPQKVTKQDWHDRLKNIRIGKKGVDNTEKSDNSTMSFHIFDENLYPKSPKSTSEAKGSDVFSFAEVSNAIDVNNIPPSSVIKQLAVAVETGKKFKSMKDLMVSSRDSSPVRERAGLSLSAVKSLVLREEKPTSEFGDNEKVLSLIHLLLDAEGDFLRRKFGSDAETLATKMSLPREIHAAPPESLVVKLSEVIGNFKTLRKMAIFWCGVVAELRKLWSEEQYVPGIPLDEIPDLNCCLLYQQLQVINCCISRKRRHVIATESLDSVIREAGSNIEEPFVSKGLVDEKSILYARISTGELVLRLGAGRPSDNLMMLETGEPIYVPVTQEGPLLTEDLIKETEEFVLRTGRHSLTICLIFSPMLSVGAGCSQLLSDMQAFKAANPGSILEDFVRWHSPPDWTDTEPSDEFKDTFDGGDSLSARGQLSSRMRKEGNLWCELWKTAKPLPAVKQAPLFDEDLAVEGILHFLDDIPPSELFKQLFVSLLGLGFVIAEATLSTNSNLSKLFHECKDYTIATCQRGTWIDKIDDLCQVYETVEMMLLHPEEILKIMKQPEEAAANADEPKRRFRRLAQIFGGKDRPARKPASKDQNVSEENPIRQPFSNMFDGRSSLFSKKPPKPDSTITADKPPLEENDWTIV*	707

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi19g0619	706	MobiDBLite	consensus disorder prediction	1	101	-	-
	Vvi19g0619	706	MobiDBLite	consensus disorder prediction	645	706	-	-
	Vvi19g0619	706	MobiDBLite	consensus disorder prediction	51	97	-	-
	Vvi19g0619	706	PANTHER	RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT	76	691	IPR045700	GO:0005096\|GO:0043547
	Vvi19g0619	706	MobiDBLite	consensus disorder prediction	22	44	-	-
	Vvi19g0619	706	MobiDBLite	consensus disorder prediction	658	677	-	-
	Vvi19g0619	706	Pfam	Rab3 GTPase-activating protein catalytic subunit	371	537	IPR026147	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi19g0619	Vvi-Chr19	6765285	6778665	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi19g0619	K18270		-	vvi:100265786	1348.57