Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0608 ATGTCTTGGAAGAGCAGAGGAATAGAGCCAAGTTCAAAGAGCGTTGTGTCCAGGAAATGGACTCTTCTGTTCTGTATTGGTTGTTTTTGTGCTGGGATGCTCTTCTCTGACAGAATGTGGACAATGCCTGAAGCTAAGGGTATATCAAGGACAACAAGGACTGAAGATGAAGAGCTGAAGTTGGTTTCAGAAGGTTGTGCGCCAACTACTAAGGATGTAAAGCATAAATCCAAGGACATTCTAGGGGAAGTTTCAAGGACTCATTATGCTATACAAACGCTGGATAAAACAATTTCAAATTTGGAGATGGAATTAGCAGCTGCAAGAGCTGCACAGGAGTCTATACTTAATGGATCTCCCATAACAGAAGATTTACCAATTACTAAATCGAGTGGGAGAAGAAAATATTTAATGGTTATTGGCATCAATACTGCTTTTAGTAGTAGAAAGCGGAGAGATTCAGTTCGCGCTACTTGGATGCCACAAGGTGATAAAAGAAAGAAGCTTGAGGAAGAGAAGGGCATCATAGTTCGCTTTGTAATAGGTCACAGTGCTACATCAGGGGGCATTCTTGATAGAGCTATTGAAGCAGAGGACAGAAGGCATGGTGACTTTTTAAGGCTGGAACATGTAGAGGGGTACCTTGAATTATCAGCAAAGACGAAGGCATACTTCGCCACTGCTGTTGCTATGTGGGATGCAGATTTCTATGTCAAAGTAGATGATGATGTCCATGTAAATATAGCAACACTGGGAGCAACTTTAGCGAGGCACCGTTCAAAACCTAGGATTTACATTGGATGCATGAAATCTGGACCTGTTCTAGCTCAAAAGGGAGTCAGATACCATGAACCTGAATACTGGAAATTTGGTGAGGAGGGTAACAAGTATTTCCGTCATGCTACTGGGCAGCTATATGCTATTTCAAAAGATTTGGCTACTTATATATCAATTAACCAGCATGTGCTTCACAAGTATGCTAATGAGGATGTTTCATTGGGATCTTGGTTTATTGGTTTGGACGCAGAGCATATTGATGACCGGCGACTGTGTTGCGGTACCCCACCAGATTGTGAGTGGAAAGCTCAGGCAGGCAACATCTGTGTTGCTTCATTTGACTGGAGCTGCAGCGGGATTTGCAGATCTTCTGAGAGGATCAGGGAGGTCCACCGGCGGTGCGGGGAAGGTGAGAATGCTGTGTGGAGTGCAGTCTTCTGA 1218 0.4368 MSWKSRGIEPSSKSVVSRKWTLLFCIGCFCAGMLFSDRMWTMPEAKGISRTTRTEDEELKLVSEGCAPTTKDVKHKSKDILGEVSRTHYAIQTLDKTISNLEMELAAARAAQESILNGSPITEDLPITKSSGRRKYLMVIGINTAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIIVRFVIGHSATSGGILDRAIEAEDRRHGDFLRLEHVEGYLELSAKTKAYFATAVAMWDADFYVKVDDDVHVNIATLGATLARHRSKPRIYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLATYISINQHVLHKYANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSSERIREVHRRCGEGENAVWSAVF* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0608 405 Coils Coil 91 111 - -
Vvi19g0608 405 Pfam Galactosyltransferase 150 346 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vvi19g0608 405 Pfam Domain of unknown function (DUF4094) 17 110 IPR025298 -
Vvi19g0608 405 Gene3D - 133 347 - -
Vvi19g0608 405 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 95 345 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vvi19g0608 405 FunFam Hexosyltransferase 130 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0608 Vvi-Chr19 6671725 6678055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0608 1 405 Glycosyltransferase AT1G05170 76.961 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0608 K20855 - vvi:100264061 832.017