Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0605 ATGGCTACTGCTTTTACCCATATCAATGGTCAGAACTTCATCTCCACGCTCCACAGATCCAATCATCGCCGTCCATCGGGTGGCCCCATCAGGGTCACCATGGCTCAGAAGAGCTCATACTGGACCTCCATTAACGACGACATCGACGCCCATCTCAGACGGGTTATTGCCATCCGGGAACCGTTCTCCGTCTTCAAGCCCATGCACCACCTCACTTTCGCGGCCCCGGAGACCACGGCGCCGGCGCTCTGCATCGCCGCCTGCGAGCTCGTTGGCGGCCGGCGGGAGCTTGCCATCGCCGCCGCGTCCGCGCTCCACCTCATGCACGCGGCCTCGTACTTCCACGAGCACATCCCATTAACGGATCAGCCCAGGGCCAATTCCCCGCCCAGACCCGGCCCCACGTTCGGCCCAAACATTGAGCTTCTCACGGGCGACGGCATGATCCCATTCGGGTTGGAATTACTAGCAAAATCCAACAACCTGGATGACGATGACGAGCATTCGGATCGGATCCTCCAAGTCATCATCGAACTCACACGTACCATCGGCTCGCAAGGGGTCGTGAACGGGCAGTACATCCAAGCCCAATGCGACGAATCCAGCCCCAGCGTCGGGAAGGCCGGGTCGACCCGAATCGTGACCGATAAAAAGGGAACTGAGTTGCACGCGTGCGGAGCAGCCTGTGGAGCAATACTAGGTGGTGGGAAGGAGAAGGAGATAGAAAAATTAAGAAAATATGGGTTCTATGCTGGAACAATACAGAAAATGTCAAAATTAGAGGAAGTAGAGAAGAACAGAGAAGTAATAGAGGAAATGAGAAGGCTGGCACTCAAGGAATTGGAGTACTTCGATGAAGAGAAAGTGGAACCAATTTCTAGTTTTATCAATGTTTAG 897 0.5474 MATAFTHINGQNFISTLHRSNHRRPSGGPIRVTMAQKSSYWTSINDDIDAHLRRVIAIREPFSVFKPMHHLTFAAPETTAPALCIAACELVGGRRELAIAAASALHLMHAASYFHEHIPLTDQPRANSPPRPGPTFGPNIELLTGDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELTRTIGSQGVVNGQYIQAQCDESSPSVGKAGSTRIVTDKKGTELHACGAACGAILGGGKEKEIEKLRKYGFYAGTIQKMSKLEEVEKNREVIEEMRRLALKELEYFDEEKVEPISSFINV* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0605 298 Coils Coil 260 280 - -
Vvi19g0605 298 Gene3D Farnesyl Diphosphate Synthase 32 298 IPR008949 -
Vvi19g0605 298 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 35 253 - -
Vvi19g0605 298 SUPERFAMILY Terpenoid synthases 39 254 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0605 Vvi-Chr19 6656884 6657780 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0605 K13789 - vvi:100257234 573.163