Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0596 ATGGCGAAGGGACTGCAGCAGCAGGCCGGAGGGCAAAATCTTCCGGCGGACGTGACGGCGCTGATTGATCAACTGGAGCGGCACTGCTTGGCTCCTGATGGGTCTCTCGTCTCCAAATCTGCCTACTACGATCTCCAATTGGCAAGAGAGGAGATGGCAAGAGAGAGGCTTCGCTATTTTGAAGCCATGGCAATCTACTGCGAAGCAATTGCAATGGTGGAAGAGTATCAACAGGCTGTGTCAGTGGCAAATCTTGGAGGAATTCGGGATGTTCAGGGACTATATCCACAACTAGGCTTGAAGAATTCTCCTCAGGTTTATGAAACTCTAGAGCATCGACTGGTTGTTGCAGAAGCAGCTCAAAGATTGAGGCTTCCTCTTATTTCCAAAGATGGTGAAATTCATGAGGAAGAAATTGAGAAATGGAGTATAATGTCACGAAGCTCTCTTGATAGTACAAGTACCAGCATCACAATCAGTTCAAGCTCAAATTCCACTAACTATACAAATAGTTCTGTTAATATCACAGCAGAAAGGGCAAGTAATGCACTTTCTCTTGGTACTGATACATCAGAACCTGAAGTTGGTGGTGTTCCCAACCGCTTTCTAGGAATAACACCTGCTTATTTATGGCAAACTCAGCTCCAACAAACACCCTTATCAATGGATATGACAGACTACCAGATGTCACTTTCTCGTGAGATTGAGTCACGTTTAAAAGCTAAATGTGACAAGTTGGCTGACGTTTTTGTAATGGATGACATTGATTCTTCATCACGTACTCAAAACTCAAGTGCTCGGCTTCCAGAAAGGGTGAAGTTAATCATTGAGGAGATTGAAAGGGAAGAAGCTGCTTTGCGGGAGGACCTCTATTCTGCTGATAGAAAGTTTGCAGAATACTACAATGTCTTAGAGCAGATACTTGGAGTGCTTATTAAGCTTGTCAAAGATTTGAAATTGCAACATCAACATAAATATGATGAACTACAAAAAACTTGGCTATGTAAAAGGTGTGAGACCATGAGTGCAAAATTGAGGGTTTTGGAGCATATTCTCCTCCTTGAAACTTACACTCAGGATTCGATACCGGCACTCCATAAAATAAGGAAGTATCTTCTTGAGGCTACAGAAGAAGCTTCAATTGCATACAATAAAGCAGTGACACGCCTTAGAGAGTACCAAGGTGTTGATCCTCACTTTGATACAATTGCAAGGCAGTATCACGAAATTGTAAAGAAATTGGAGAACATGCAATGGACGATACACCAAGTCGAAATGGACCTCAAACGTCTACCTGATCATCCCAGCACATAA 1314 0.4269 MAKGLQQQAGGQNLPADVTALIDQLERHCLAPDGSLVSKSAYYDLQLAREEMARERLRYFEAMAIYCEAIAMVEEYQQAVSVANLGGIRDVQGLYPQLGLKNSPQVYETLEHRLVVAEAAQRLRLPLISKDGEIHEEEIEKWSIMSRSSLDSTSTSITISSSSNSTNYTNSSVNITAERASNALSLGTDTSEPEVGGVPNRFLGITPAYLWQTQLQQTPLSMDMTDYQMSLSREIESRLKAKCDKLADVFVMDDIDSSSRTQNSSARLPERVKLIIEEIEREEAALREDLYSADRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHILLLETYTQDSIPALHKIRKYLLEATEEASIAYNKAVTRLREYQGVDPHFDTIARQYHEIVKKLENMQWTIHQVEMDLKRLPDHPST* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0596 437 Coils Coil 276 296 - -
Vvi19g0596 437 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 1 429 IPR029327 GO:0051225|GO:0070652
Vvi19g0596 437 Pfam HAUS augmin-like complex subunit 4 191 426 IPR029327 GO:0051225|GO:0070652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0596 K16587 - vvi:100253742 795.808