Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0585 ATGGAGAAAACTGCAAGTGGTTCTGTTATGAGGAATAGAAGGTTGGAGAGTTTCTTCAACGCAAGTCCTATTCCAAACATGGGGGTGTCCTGGAAAATAGGCTCCAAGAAAGGGGTAGGAGAGAAGCCGAAAACCGATTTGTATGTTGAGGATGATGGATGGCTGTCTATACTGATATCCTGGATTCGGATTGTCACATGTTTTGTGTCGATGATGGTTACTACCTTTGTGTGGGCCTTAATCATGCTTGTGCTTCTTCCATGGCCTTATGAGAGACTAAGGCAAGGGAATATTTATGGGCATGTGACTGGTCGAATGCTGATGTGGATTTTGGGGAATCCTATAAAGATTGAAGGTGCCGAGTACGCTAACACAAGGGCTATTTATATCTGTAATCATGCATCTCCAATCGACATTTTCCTTATGATGTGGTTGACTCCAACGGGCACTGTTGGCATTGCAAAGAAAGAGATTGTATGGTACCCTTTGTTTGGGCAACTTTATGTCTTGGCCAACCATCTCCGCATTGATCGCTCCAACCCAACTGCAGCCATCCAGTCCATGAAGGAGGTGGCTCGTGCAATTGTAAAAAACAAACTGTCCTTGATCCTTTTTCCTGAGGGCACCAGGTCCAAGGATGGACGATTACTCCCTTTTAAAAAGGGTTTTGTCCACTTGGCAATGCAATCGCACCTCCCTATCGTTCCAATTGTCCTGACAGGCACTCATCTTGCATGGAGGAAGGGCAGCTTACATGTTCGACCAGCACCCCTTACTGTAAAGTATCTTCCCCCAATCAAAACCGATGATTGGACTGCAGACAAGATCGATGACCATGTAAAAATGGTACATGACATATACATCAAACACCTCCCACAGCCTCAGAGACCTCTTGTGGTAGAAGAAGAAACTCCCACCAAGGGCTGA 927 0.4552 MEKTASGSVMRNRRLESFFNASPIPNMGVSWKIGSKKGVGEKPKTDLYVEDDGWLSILISWIRIVTCFVSMMVTTFVWALIMLVLLPWPYERLRQGNIYGHVTGRMLMWILGNPIKIEGAEYANTRAIYICNHASPIDIFLMMWLTPTGTVGIAKKEIVWYPLFGQLYVLANHLRIDRSNPTAAIQSMKEVARAIVKNKLSLILFPEGTRSKDGRLLPFKKGFVHLAMQSHLPIVPIVLTGTHLAWRKGSLHVRPAPLTVKYLPPIKTDDWTADKIDDHVKMVHDIYIKHLPQPQRPLVVEEETPTKG* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0585 308 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 60 298 - -
Vvi19g0585 308 Pfam Acyltransferase 115 239 IPR002123 GO:0016746
Vvi19g0585 308 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 61 281 - -
Vvi19g0585 308 CDD LPLAT_AGPAT-like 105 277 - -
Vvi19g0585 308 SMART plsc_2 127 242 IPR002123 GO:0016746
Vvi19g0585 308 NCBIfam 1-acylglycerol-3-phosphate O-acyltransferase 124 239 IPR004552 GO:0003841|GO:0008654|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0585 Vvi-Chr19 6477850 6480834 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0585 64 242 Acyl Lipid Metabolism Gene Families AT4G30580 32.804 9.96e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0585 K13509 - vvi:100245306 634.795