Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0579 ATGGGAGGTGTTGGCAAGACAACCTTGGTGAAAGAAGTTGGAAAGAAAGTGAAAAAAGACAAGCTTTTTGATGAAGTTGCAATTGCAGTGGTGTCTCAGGCTCCGGACCTGATAAAGATTCAAGATGAAATTGCAGATGCATTGGGTCTGGAATTTCATGAGGAGAAAGAAATTGGAAGAGCGGGTCGGCTTCGTGAAAGACTGAAGACAGAGAAGAGGGTCCTAGTAATCTTGGATGACGTTTGGGAGAGACTTGACTTGGGGGCAATAGGAATTCCTCATGGTGTTGATCACAGGGGCTGCAAAATTCTTCTCACTACACGACGTGAACATACATGCAATGTGATGGGAAGCCAAGCAACAAAGATTCTTCTAAATATCTTAAATGAACAAGAATCATGGGCCTTGTTTAGGTCAAATGCTGGTGCAACTGTTGACTCCCCTGCTGTCAATGTTGTGGCAACAGAAATTGCAAAGAAGTGCGGAGGTTTACCTCTAGCGCTTGTAGCAGTTGGAAGGGCTCTAAGTGATAAAGACATAGATGGATGGCAGGAAGCGGCCAAGCAACTTAAGGAGTGTAAACCTATGAACATCCAAGATGTGGATGCAGACTTTTTTTCGTGTCTTAAGCTTAGTTTCGACTATCTTCAAGGAGAGGAAATCAAGTCAATCTTCTTACTGTGCTGTCTATTTCCAGAAGATCGCAACATTGAACTGGAGTACTTGACAAGGCTTGCAATGGGGCAAGGATTGCTTGAAGATGTTGAGACAGTAGAAGAAGGAAGAAGGCGGGTACGAACACTGATCAAGGGACTTAAAGCTTCTTGTCTGTTAATGGATGGCGATAAGAGTAAAGGGTCTCTGAAAATGCATGACCTTGTCCGTGTCTTTGCCATATCAATTACATCCACTGAAAAGTATGCCTTCATGGTGAAAGCTGGGGTGGGTTTGAAGAACTGGCCAAAGAAAGGTACTTTTGAGCATTATGCTTTGATATCATTGATGGCGAACAATATTTCTAGTCTTCCAGTTGGTCTGGAATGTCCAAAACTGCATACTTTATTGTTGGGTGGGAACCGTGGCTTAAAAATATTTCCGGATGCTTTCTTTGTGGGAATGAAAACACTCAAGGTTCTGGATTTAACTGCAATTAGTAAAAAGCTCTATAGGTATTCTCTTCACATCACACCACTACCAGCATCCCTCCAACTCCTTACTGACCTCAGGATGCTTCACCTCCATCATCGGAAGTTAGGTGATATATCTATACTTGGAAAGCTGAAGAAGCTGGAGATCCTTAGCTTTTTTGCTTCACATATCAGCGAGTTGCCCAAGGAGATGGGAGAACTGAAGAATCTGAAGTTGTTGGATCTTACCTACTGCCGATCTTTAAAGAAAATTCCACCTAACTTGATATCAGGTCTGTCAGCATTAGAAGAACTATACATGAGAGGAAGCTTTCAACAATGGGATGTTGGTGGAACAACCATAGAAAGAAGCAGTGCAAGTCTATCTGAGCTTAACTCACTACTCAACTTGACCACTTTACATGTCGAGATAATCAATGCCAAATGTATTCCAAATAGTTTCTTATTTCCAAATCAGTTAAGGTTTCAGATATACATCGGTTCCAAGTTATCTTTTGCAACGTTCACAAGAAAGTTAAAATATGATTATCCGACATCTAAAGCCCTGGAACTCAAAGGTATTGATAGCCCCATACCAATTGGGGTTAAGATGTTGTTTGAGAGAACAGAGGATCTATCTTTGATTAGTTTGTTAGAAGGTTCTCGCAATATTCTCCCCAACTTGGGTTCAAGGGGCTTTAATGGATTGACATCTCTGAGTGTGAGGAACTGTGTTGAGTTTGAATGTATCATTGATACGACACAAGGTGTTCATCCAGTTGCATTCCCCAATATCGAGACAATACATCTCACCCACCTTTGTGGCATGAAGGTACTGTCTAGTGGCACCCTTCCTATGGGGTCTTTTAGAAAACTGAGAGTTCTGACTGTGGAACAATGTGGAGGATTGTCTACTCTCTTTCCAGCTGATCTGCTTCAACTGTTACAGAATTTGGAAATAGTGCAAATAACTTGTTGTCAGGAAATGCAAGATGTGTTTCAAATTGAAGGGATTCTGGTTGGAGAGGAACATGTTCTGCCACTCTCTTCTTTAAGAGAATTGAAATTGGACACCTTGCCTCAATTGGAGCATTTATGGAAGGGGTTCGGTGCTCACTTAAGCCTCCATAATCTTGAAGTTATTGAAATTGAAAGATGTAACAGATTGAGGAATCTCTTTCAGCCTTCTATTGCTCAGAGTTTGTTTAAACTGGAGTACCTCAAAATAGTAGACTGTATGGAGTTGCAGCAAATTATAGCTGAGGATGGGCTAGAGCAAGAAGTATCAAATGTTGAAGACAAGAAATCTCTCAACCTTCCAAAACTGAAAGTTCTGGAGGTAGAAGATTGCAAGAAATTGAAGAGTCTCTTTTCAGTTAGCAGTGCACAAAGTTTTCTGCAACTAAAACAACTCAAAGTAAGTGGAAGCAATGAATTGAAAGCAATTATAAGCTGTGAGTGTGGAGAAATATCAGCAGCGGTGGATAAGTTTGTGCTCCCTCAGTTAAGCAACTTGGAGCTTAAAGCTCTGCCGGTCCTTGAGAGCTTCTGTAAGGGAAATTTTCCATTTGAATGGCCATCACTAGAAGAAGATCAGAGCTTGAGTTTGTTCAGAAATTGA 2748 0.4119 MGGVGKTTLVKEVGKKVKKDKLFDEVAIAVVSQAPDLIKIQDEIADALGLEFHEEKEIGRAGRLRERLKTEKRVLVILDDVWERLDLGAIGIPHGVDHRGCKILLTTRREHTCNVMGSQATKILLNILNEQESWALFRSNAGATVDSPAVNVVATEIAKKCGGLPLALVAVGRALSDKDIDGWQEAAKQLKECKPMNIQDVDADFFSCLKLSFDYLQGEEIKSIFLLCCLFPEDRNIELEYLTRLAMGQGLLEDVETVEEGRRRVRTLIKGLKASCLLMDGDKSKGSLKMHDLVRVFAISITSTEKYAFMVKAGVGLKNWPKKGTFEHYALISLMANNISSLPVGLECPKLHTLLLGGNRGLKIFPDAFFVGMKTLKVLDLTAISKKLYRYSLHITPLPASLQLLTDLRMLHLHHRKLGDISILGKLKKLEILSFFASHISELPKEMGELKNLKLLDLTYCRSLKKIPPNLISGLSALEELYMRGSFQQWDVGGTTIERSSASLSELNSLLNLTTLHVEIINAKCIPNSFLFPNQLRFQIYIGSKLSFATFTRKLKYDYPTSKALELKGIDSPIPIGVKMLFERTEDLSLISLLEGSRNILPNLGSRGFNGLTSLSVRNCVEFECIIDTTQGVHPVAFPNIETIHLTHLCGMKVLSSGTLPMGSFRKLRVLTVEQCGGLSTLFPADLLQLLQNLEIVQITCCQEMQDVFQIEGILVGEEHVLPLSSLRELKLDTLPQLEHLWKGFGAHLSLHNLEVIEIERCNRLRNLFQPSIAQSLFKLEYLKIVDCMELQQIIAEDGLEQEVSNVEDKKSLNLPKLKVLEVEDCKKLKSLFSVSSAQSFLQLKQLKVSGSNELKAIISCECGEISAAVDKFVLPQLSNLELKALPVLESFCKGNFPFEWPSLEEDQSLSLFRN* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0579 915 PRINTS Disease resistance protein signature 161 175 - -
Vvi19g0579 915 PRINTS Disease resistance protein signature 68 82 - -
Vvi19g0579 915 PRINTS Disease resistance protein signature 448 464 - -
Vvi19g0579 915 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 692 821 - -
Vvi19g0579 915 Gene3D Ribonuclease Inhibitor 325 906 IPR032675 -
Vvi19g0579 915 Gene3D - 213 300 IPR036388 -
Vvi19g0579 915 Gene3D - 1 126 IPR027417 -
Vvi19g0579 915 SUPERFAMILY L domain-like 289 861 - -
Vvi19g0579 915 Gene3D - 128 212 IPR042197 -
Vvi19g0579 915 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 228 IPR027417 -
Vvi19g0579 915 Pfam NB-ARC domain 1 212 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0579 Vvi-Chr19 6368730 6371752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0579 370 487 Receptor kinase-like Gene Family AT5G65700 30.579 2.76e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0579 - - vvi:100258845 1733