Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0569 ATGGCACCATCTTCTCCCTCCGCCTGTCTCCTCCAAACCACCCATCTCAGAACCTTCCTCTTAATCTCTCTTCTGGTCTTTGTGCCCCCCATTCATGCGCTGAAACCCCCAATTCGGCCGCGGGATATTCTGCCGTTGTTGCCCAGACAGCTCTCATGGCCGATTCTCAACTCCCTCCACAGCGCAGTGGACCTTCTGCCCACTTTTGTGGGCTCTGCCTCCTCCAACGACACTGTCGAGTGGAAAGGGACGTGCTTTTACGAGACCAGGGCTTGGATGGAGTTCAACAACAAAAGTGGGAGCGAATTTGGTGGGGGCACACTTCATATTAAGGTTAGTAGTGCCCATAGTTGGACATGTATGGACCTTTATGTCTTTGCAACTCCATACCAAGTGACATGGGATTACTACTTTTTGTCTCGGGAGCATACCATTGAGTTCAATGCATGGGAAGAAAAAGCTGAGTTTGAATACGTGAAAAACAAAGGGGTTTCAGTTTTTCTCATGCAAGCTGGGATGCTGGGAACCCTTGAAGCTCTCTGGGATGTCTTCCCATTATTCACAAATACTGGATGGGGTGAGAACGCAAACCTTGGGTTTCTCAAGAAGCATATGGGGGCTTCATTTCAAACACGTCCTCAGCCATGGGTTACAAACATTAGTGTTGATGATCTTCACTCTGGAGATTTCCTTGCAATATCAAAAATTCGTGGACGGTGGGGTGGTTTTGAGACTCTAGAGAAGTGGGTCACTGGATCTTATGCTGGTCATTCCGCAGTTTGCTTAAGGGATTCTGAAGGGAAGCTATGGGTTGGTGAATCAGGACATAGAAATGAAAAGGGAGAAGATGTTATTGTGACATTACCATGGGACGAATGGTGGGATGATGTGCTGACTCAAGATGATTCCAATTCTCATATTGCGTTGCTTCCTTTGCATCCTCACCTCCGAGCCAAGTTTAATGAGACAGCTGCCTGGGAGTATGCACGTAGCAGTGAAGGCAAACCTTATGGTTACCATAACATGATATTTAGCTGGATAGATACTCTGGATGAAAACTATCCACCCCCCTTAGATGCTCATGTGGTTGCTTCGGTTATGACAGTTTGGAATCAAATGAAGCCTGCATATGCTGCTAACTTATGGAATGAGGCCTTGAACAAGAGGCTTGGAACTCAGGACCTTGCTCTTCCTGAGATTCTGGTTGAAACTGAAAAGCGTGGATCATCATTTGATGAATTGCTGACAATTCCTGAGCAGGATGATTGGGTTTACACTGATGGAAAGTCAACATCTTGTGTTGCTTTCATTCTGGAAATGTATAAGGAGGCAGGATTATTTGGTCCAAGTGCTAGCTCTATTCAAGTAACTGAGTTCACGATAAAAGATGCATACACACTGAATTTTTTTGAAAATAATTCAAGCCGCCTGCCAAAGTGGTGCAATGATGGGGACAATGTGCAGCTCCCTTATTGTCAGATCAAAGGAAAGTATCGAATGGAATTGCCAGAGTACAATACCCTGGATCCATACCCTCATATGAATGAAAGATGCCCATCCCTGCCTCCAAAATACTTGAGGTCGGCAAATTGCTGA 1596 0.4561 MAPSSPSACLLQTTHLRTFLLISLLVFVPPIHALKPPIRPRDILPLLPRQLSWPILNSLHSAVDLLPTFVGSASSNDTVEWKGTCFYETRAWMEFNNKSGSEFGGGTLHIKVSSAHSWTCMDLYVFATPYQVTWDYYFLSREHTIEFNAWEEKAEFEYVKNKGVSVFLMQAGMLGTLEALWDVFPLFTNTGWGENANLGFLKKHMGASFQTRPQPWVTNISVDDLHSGDFLAISKIRGRWGGFETLEKWVTGSYAGHSAVCLRDSEGKLWVGESGHRNEKGEDVIVTLPWDEWWDDVLTQDDSNSHIALLPLHPHLRAKFNETAAWEYARSSEGKPYGYHNMIFSWIDTLDENYPPPLDAHVVASVMTVWNQMKPAYAANLWNEALNKRLGTQDLALPEILVETEKRGSSFDELLTIPEQDDWVYTDGKSTSCVAFILEMYKEAGLFGPSASSIQVTEFTIKDAYTLNFFENNSSRLPKWCNDGDNVQLPYCQIKGKYRMELPEYNTLDPYPHMNERCPSLPPKYLRSANC* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0569 531 PANTHER OS01G0793500 PROTEIN 31 531 - -
Vvi19g0569 531 Gene3D endopeptidase domain like (from Nostoc punctiforme) 224 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0569 Vvi-Chr19 6299296 6305684 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0569 - - vvi:100267545 1108.59