Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0562 ATGATAGAATGGCTAAAACAACTACGAAAATCATTTGGGTTTTCATTCCTCTGGCTTATCTGCTTGATTTACTTCACCCAGGGTTTCAGAACTTTTGTATGGACAGCAGTTTCCTACCAGCTAAAAGACAGGCTTAAGTTGTCACCCTCAGCCTCTCAATTTGTGTATTCAATAGCAATCTTCCCATGGAGCATAAAACCATTATATGGAATTTTGTCCGACTGTATTCCAATTGGAGGAAGAAAAAGGATTCCATACTTGGTGGTTGCATCCATATTCTCTCTTTTTCCATGGCTCGTTTTAGGCCTAAATGCACCCCTAATGGATTCCAAAGTGCACCTCATGATCTCCTTAACAGTGCAGAACCTTGGCTCAGCCATGGCAGATGTTGTGGTTGATGCGATGATTGCAGAGGCAGTAAGATTTGAAAGGGCTGCATTTACTGGAGACCTCCAGTCACTATCTTGGTTGGCAATGGCTATTGGAGGAATATGTGGGAGTTTGTTGGGAGGATATGCATTAACTAACATAGAAATAGGTCAAATATTTCTTTTATTCTCTTTACTTCCATCCATACAGCTATTATCATGTGGTTTGGTCAAGGAGAATCCTTTAGGCAGTAAATTTTTGCCCGAGCTTTCTAATTCAGGAAGCTCCCAGATAGTGAATGGAGACAATAATGTTCTGGATGAAGATTCTTCCAATTCTGAAAGGTCCAGAATTAGTACTTCGAGGAGAAAGAAGAGACGAACAAACAAAAAGAAGAGAGTGGTCATTAAAAGTAAATCCCAGATCTCAGAAAAAGATGGATCATTGGCGTTACAGTGGTTCCACACTCTGAAAATGGCCGCTTGTAGTTTGTACTCTGCTTTTAGACAGCCAATCATTTTGAGACCAATGGCGTGGTTTTTCCTAGCACATGTTTCTGTTCCAAACCTTTCAACTGTCATGTTCTATTACCAGACAGAGTTCTTGAACTTGGAAGCATCATTTCTGGGGACTGTCCGTGTTGTTGGGTGGTTAGGCCTCATGCTTGGAACATTCACTTATAATCATTACTTGAAGAAGATGAGACTAAGAAGAATTCTGATGTTGGCTCATGTTGGTTATTCTTTCATGAGTCTTCTAAATATTGCTTTAGTGGCTCGAACAAATGTTGTATTTGGCATATCGGATAAGATCATGGTGCTATGTGGTTCTGCTTTTCATGATGCCATCCATCAATTCAAGTTTATGCCATTCCTCATATTATCTGGACGGCTATGCCCGCCTGGTATTGAAGGGACTTTATTTGCCCTGTTCATGTCAATAAACAATCTTGGGGCCACCATCGGATCATTTATGGGTGCTGGGTTGGCTTCAGTTCTAAACATCTCTTCGGGTTCTTTTGACAACCTTCTTTTGGGCATGGTGATTCAAGTCCTCTGCACTTTCATCCCAATTGCTTTCCTATTTTTGATACCAAAGGAGGCTACAGGGATATCGACATAA 1491 0.4085 MIEWLKQLRKSFGFSFLWLICLIYFTQGFRTFVWTAVSYQLKDRLKLSPSASQFVYSIAIFPWSIKPLYGILSDCIPIGGRKRIPYLVVASIFSLFPWLVLGLNAPLMDSKVHLMISLTVQNLGSAMADVVVDAMIAEAVRFERAAFTGDLQSLSWLAMAIGGICGSLLGGYALTNIEIGQIFLLFSLLPSIQLLSCGLVKENPLGSKFLPELSNSGSSQIVNGDNNVLDEDSSNSERSRISTSRRKKRRTNKKKRVVIKSKSQISEKDGSLALQWFHTLKMAACSLYSAFRQPIILRPMAWFFLAHVSVPNLSTVMFYYQTEFLNLEASFLGTVRVVGWLGLMLGTFTYNHYLKKMRLRRILMLAHVGYSFMSLLNIALVARTNVVFGISDKIMVLCGSAFHDAIHQFKFMPFLILSGRLCPPGIEGTLFALFMSINNLGATIGSFMGAGLASVLNISSGSFDNLLLGMVIQVLCTFIPIAFLFLIPKEATGIST* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0562 496 CDD MFS_FBT 18 485 - -
Vvi19g0562 496 NCBIfam folate/biopterin family MFS transporter 19 490 IPR004324 GO:0016020
Vvi19g0562 496 SUPERFAMILY MFS general substrate transporter 17 490 IPR036259 -
Vvi19g0562 496 Pfam BT1 family 27 490 IPR039309 -
Vvi19g0562 496 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 3 492 IPR039309 -
Vvi19g0562 496 Gene3D MFS general substrate transporter like domains 15 485 IPR036259 -
Vvi19g0562 496 MobiDBLite consensus disorder prediction 221 262 - -
Vvi19g0562 496 MobiDBLite consensus disorder prediction 242 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0562 Vvi-Chr19 6246855 6252380 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0562 - - vvi:100257271 926.006