Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0560 ATGGCAGGAGAACAACCAGAGACCATTGTGGAGGAAAGAGAAGAATTCATGGTCCCACTCACTACTGATCCAAACCCAACTCTCAGAACTGCCCATTTCCTCAAACCTTCTCTGGCTTCCATCAACCAACAGCCTCTCTTCAAACCTCCTTCTCTTTCCTCTCCACTGACTGATTTTGAACCTGGTGAATGGCCGTTGAAGCTGGTTTTCACTGGGTGGATAGACCCACAAAAGAATTGGAAAACTTGGGTTGATCAAATGCATCCTCAACACCAATCTACATGGAGGAAAGCTGGAATTAATGAAGCAATCATGTGTTCTACTTACAAAACCCGAAGAAACCATGATCTGTTTTGGGGCCTTGCAGAGAGGTGGTGTCCTTCCACCAACTCATTCATCTTTCCTTGGGGTGAAACTACAATCACACTGGAGGATATCATAGTTTTGGGGGGTTTCTCTGTTATAGGTGAGCCTGTTTCCAAGCCTCTCGAAACAACTGAGTTGATGAAACTTGAAGAAAACCTATTGAAATTGCTAACACAGTTAAAGAAAACCTTGAAGTCCTGCCACCAGGAATGGATGAAGCGATTCATGGGTAAGGGCAGTGAATTGGAGCACATAGCCTTTCTTTTCCTGTGGTTATCAAGGTATGTCTTCGGCCAAAAGTTTCCAAATACTATTGGTGGGAATCTACTGTCTGTGGCAATCCATCTAGCTCGTGGCACCCGACTTGCGCTTGGGCCTGCAGTTCTTGCTAGCATTTACAGAGACTTGAGTTTGTTGAAGGAAACAATTATAGCTTCAACAGAATTACGGATGGATGGAAGTGATGGTGATATTTTATCACTCACTCTCCAGGCTCCTCTTCGCCTGGTTCAGGTTTGGGCTTGGGAGAGGTTTCCTGGGCTGCGGCCAGAGCCTAATGCCATGAATCATGGTGAGCCAAGAATAGCCCGGTGGCATGGATTGAAAAGGTTGAAAATTGAGAATGTGAGGATGGTTTTAGACTCTGCTCAAGACTGTTTTCAATGGCGGCCTTATGCCACCACAGTGAGCAATTGGTCTTTCCCCAAGTTTTACATTGAAAAAGAAGAGTGGATGGTGGTTGATTCTTATTTGGATCAAGAATTGCAATCATTTGCTCAATGCCTAAGGGTCTGTGAGCTGGTTGGAATAGACTGTATAGAACTGTATCTCCCTCATCGCGTAGCAATGCAATTTGGAATTGATCAAGATCTTCCATGTACTGTCACTAAATCCCATGAGAGTCCTGAAACTGCCTGGAGTAACTACGGTAAGCCGATTTGGAATGCGAAGTTGTATGTTCCATCTCGACTCTTTGAGGGCGATGTTACCACCCAATACTTGTCATGGTGGAAGCAGTCCACTTGGCCTTCACAAGCTGCCTTTACGGGTGTCATAAGGCAGCCAAGAAGTTTGCGGAGAAGTAGAAGATCTCTATGGGGTTCAACAGTTAAGAAAGAGGTTGATGATAATGCTGAGGTTCCTCCTGGTTTTCTTCATAAATACAATATGGTGTACCCCAGGACTTCTGAAAGCTATCTCAGGAGTTCAAAAGGAAAGAAAGGAGATAATGATGGCGATGTTCCTCCTGGTTTTGGCCACAGAAGCAACCTGATACATCAGATAGAAAAAACTATGCAGAATGAAGCTGTGCCCAGAGGTTCAGAGGGAGCTGCTGAAGCTGCTAATGAGAGTGATGTTTATAATACTCCAAAAATGAATGATAATGAAGGACAGAACAGAAGCTACAAAGCAGTTGAGATTCCTGGACTGGAACTTGAAGCTCGTATTAGCAGGCTTGAAAGAGTGATTGCTGAGCTGAAAGCAGAAAGATTGGCTGCACGTTTGACTAGCATCACAAAGCAATAG 1893 0.4443 MAGEQPETIVEEREEFMVPLTTDPNPTLRTAHFLKPSLASINQQPLFKPPSLSSPLTDFEPGEWPLKLVFTGWIDPQKNWKTWVDQMHPQHQSTWRKAGINEAIMCSTYKTRRNHDLFWGLAERWCPSTNSFIFPWGETTITLEDIIVLGGFSVIGEPVSKPLETTELMKLEENLLKLLTQLKKTLKSCHQEWMKRFMGKGSELEHIAFLFLWLSRYVFGQKFPNTIGGNLLSVAIHLARGTRLALGPAVLASIYRDLSLLKETIIASTELRMDGSDGDILSLTLQAPLRLVQVWAWERFPGLRPEPNAMNHGEPRIARWHGLKRLKIENVRMVLDSAQDCFQWRPYATTVSNWSFPKFYIEKEEWMVVDSYLDQELQSFAQCLRVCELVGIDCIELYLPHRVAMQFGIDQDLPCTVTKSHESPETAWSNYGKPIWNAKLYVPSRLFEGDVTTQYLSWWKQSTWPSQAAFTGVIRQPRSLRRSRRSLWGSTVKKEVDDNAEVPPGFLHKYNMVYPRTSESYLRSSKGKKGDNDGDVPPGFGHRSNLIHQIEKTMQNEAVPRGSEGAAEAANESDVYNTPKMNDNEGQNRSYKAVEIPGLELEARISRLERVIAELKAERLAARLTSITKQ* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0560 630 Coils Coil 598 625 - -
Vvi19g0560 630 Coils Coil 168 188 - -
Vvi19g0560 630 Pfam Plant mobile domain 99 460 IPR019557 -
Vvi19g0560 630 PANTHER PROTEIN MAIN-LIKE 2 63 471 IPR044824 GO:0010073|GO:0048507
Vvi19g0560 630 MobiDBLite consensus disorder prediction 563 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0560 Vvi-Chr19 6234393 6236285 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0560 - - vvi:109121846 1230.7