Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0558 ATGGCTTCAGGAGGAACCAAATCGTCAAAACCTGCAAAACCCCCAAACCCATCTTCAACTTCTCAGTCTTCGGTCAGATCAACATCCTCTTCTGTCTCCACTCACCTCGCGATGGTGGAGCTCAAGCAGCGCATTCTGACCTCCCTCTCCAAGCTCTCCGACCGCGACACCCACCAAATCGCCGTTGACGACCTCCACAATCTCATCCAGAATCTCTCTACTGACTCCGGCGTCTCCATCCTCCTCAATTGCCTCTATGAGGCCTCCTCCGATCCCAAACCCTTAGTCAAGAAGGAGTCTCTCCGGCTTCTCGCTCTCCTCTGCACCTCCCACCCCGATTCCACCTCCTCCCACCTTACCAAAATCATCTCCCACATTGTCCGCCGCCTCAAGGACTCTGATACCGGTGTCCGGGATGCGTGCCGCGACGCCATTGGTACTCTGTCTTCCCTGTACTTGAAGGGTGATGGTGGTGGGGGTGACAATGGGGGACTTGGGTCTGTAGTTTCGCTCTTTGTGAAGCCTCTGTTTGAGGCAATGATTGAGCAGAACAAGGGGGTTCAATCAGGGGCTGCAATGTGCTTGGCTAAGATGGTGGAATGCGCATCAGACCCGCCTGTAGGCGCCTTTCAGAAGCTCTGCTCGAGGGTCTGCAAATTGCTCAACAATCCGAATTTCTTAGCAAAGGCTGCACTTTTGCCTGTTGTGGGGAGCTTGTCTCAGGTAGGAGCAATTGCACCACAAAGCTTGGAAGCAGTGTTGCAAAGCATTCATGACTGCCTTGGGAGTCCTGATTGGGCAACACGCAAGGCTGCAGCTGATACATTAAGTACTTTAGCAATGCATTCAAACAACTTGATCATGGATGGAGCTACTTCTACACTGGCAGCACTTGAGGCTTGCCGCTTTGACAAGATAAAGCCTGTGAGAGATAGCATGACTGAAGCACTGCAGCTATGGAAGAAAGTTGCAGGAAAAGGAGATGGGGTTTCAGATGATCAGAAAGCTACATCTCATGATGGTGAAAATTCAGAGCCAGCTGAGTTTTCTGACAAGAATGGCCCAAAAGTTTCGAATCCTGGAGAGAGAAAAGCAGAAGCATCAGGGAAGGATTCATCTAATGGTTCTTCCCCTGCTAATGATTCTGTTTCCAAAACTAAGGGTGGTAGCATTCCAGACAAAGCAGTAGGGATATTAAAGAAGAAAGTACCTGCTGCCTTAACTGACAAAGAGTTGAACCCAGAATTTTTCCAGAAACTTGAAACGAGGGGTTCTGATGATTTGCCTGTAGAAGTTGTTGTCCCTCGTAGATGTCTTAATTCTGCAAACTCACACAATGAAGAAGAATCAGAACCAAATGATGCAGATTTAAGGGGAAGGTCAAATCTCATGGAGCCTGATGATGTTCATGGATCTGTCAACATTAAATATCGTAATGCAGAGAGAGGAAATGCTGGCTTGTTTTCTAAACAACGAGATTTTGATGAAGTTGCACGGGATAAATGGGCTGATGAGAGAGTAAATGGAAAAGACTCTAGAACAAGAGCATTTGATATTGATGACAGGATTGATATAAACCAAAGGGAGTCATCTGGTAGTCGTGTGGGTTTTTCCAAAACTGATGTCCAATCTGAGGGATCTTTCATGAATAACAAAGGAAATTGGTTAGCTATACAGAGACAACTATTGCAACTGGAGAGGCAACAAGCTCATCTGATGAATATGTTGCAGGATTTCATGGGTGGGTCTCATGATAGCATGGTGACTTTAGAGAACAGAGTACGGGGCCTTGAGAGAGTTGTTGAAGACATGGCACGGGATTTGTCAATATCATCAGGTAGGAGAGGTGGTAATTTTATGGTGGGATTTGAGGGATCCTCCAATAGGTCTTTAGGCAAGTATAATGGCTACCCTGATTACTCAAGTGCCAAGTTAGGAAGGGGCAGTGATGGACGAATTCCATTTGGGGAAAGATTTGGCCCTTCAGATGGAATTGCTTCAGGTATGAGGGGCAGGGGCCCTCCATGGAGATCAGACATGGCTGAGGCCTGGGATTTTCCAACATATGGTGCTCCCAAAAATGGGCAAATGGGCTCTAGGAGAGCTCTGGTGAGTGGTCCTGTAGATGGTAGATCACCAAAAGCTGAACATGAGAGTGATCAGGTTGGTAACAGGAGGGCTTGGGATAAAGGTGCTGCACCTGTTAGGTTTGGTGAGGGCCCTTCTGCAAGAAGTGTCTGGCAAGCTTCAAAAGATGAAGCTACTCTAGAAGCAATTCGGGTGGCTGGGGAAGATAGTGGAGCAACTCGAACTGCAAGAGTAGCTATGCCTGAATTGACTGCAGAAGCTATGGGAGATGACAATGTTGTGCCAGAGCGGGATCCAGTCTGGACTTCTTGGAGCAATGCAATGGATGCACTTCATGTGGGCGATATGGATTCAGCTTATGCCGAAGTTTTGTCTACAGGGGATGACCTTTTGCTTGTGAAGCTAATGGACAGATCAGGCCCTGTAATTGATCAACTCTCAAATGATGTAGCAAGTGAGATTTTGCATGCCGTTGGGCAGTTTTTGTTGGAGCAGAATTTATTTGATATCTGTTTGTCTTGGATTCAACAGTTGGTAGATGTAGTAATGGAAAATGGACCAGATATCATGGGAATTCCAATAGAAGTAAAGAGGGAGCTTTTATTGAACTTAAATGAAGCTTCTGCAACAACAGACCCACCTGAGGACTGGGAAGGTGCAACACCTGATCAACTCTTGTTGCAGTTGGCATCTGCCTGGGGAATTGATCTGCAACAGCTTGAGAAGTAA 2817 0.4689 MASGGTKSSKPAKPPNPSSTSQSSVRSTSSSVSTHLAMVELKQRILTSLSKLSDRDTHQIAVDDLHNLIQNLSTDSGVSILLNCLYEASSDPKPLVKKESLRLLALLCTSHPDSTSSHLTKIISHIVRRLKDSDTGVRDACRDAIGTLSSLYLKGDGGGGDNGGLGSVVSLFVKPLFEAMIEQNKGVQSGAAMCLAKMVECASDPPVGAFQKLCSRVCKLLNNPNFLAKAALLPVVGSLSQVGAIAPQSLEAVLQSIHDCLGSPDWATRKAAADTLSTLAMHSNNLIMDGATSTLAALEACRFDKIKPVRDSMTEALQLWKKVAGKGDGVSDDQKATSHDGENSEPAEFSDKNGPKVSNPGERKAEASGKDSSNGSSPANDSVSKTKGGSIPDKAVGILKKKVPAALTDKELNPEFFQKLETRGSDDLPVEVVVPRRCLNSANSHNEEESEPNDADLRGRSNLMEPDDVHGSVNIKYRNAERGNAGLFSKQRDFDEVARDKWADERVNGKDSRTRAFDIDDRIDINQRESSGSRVGFSKTDVQSEGSFMNNKGNWLAIQRQLLQLERQQAHLMNMLQDFMGGSHDSMVTLENRVRGLERVVEDMARDLSISSGRRGGNFMVGFEGSSNRSLGKYNGYPDYSSAKLGRGSDGRIPFGERFGPSDGIASGMRGRGPPWRSDMAEAWDFPTYGAPKNGQMGSRRALVSGPVDGRSPKAEHESDQVGNRRAWDKGAAPVRFGEGPSARSVWQASKDEATLEAIRVAGEDSGATRTARVAMPELTAEAMGDDNVVPERDPVWTSWSNAMDALHVGDMDSAYAEVLSTGDDLLLVKLMDRSGPVIDQLSNDVASEILHAVGQFLLEQNLFDICLSWIQQLVDVVMENGPDIMGIPIEVKRELLLNLNEASATTDPPEDWEGATPDQLLLQLASAWGIDLQQLEK* 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0558 938 MobiDBLite consensus disorder prediction 325 392 - -
Vvi19g0558 938 MobiDBLite consensus disorder prediction 689 725 - -
Vvi19g0558 938 MobiDBLite consensus disorder prediction 442 460 - -
Vvi19g0558 938 SMART TOG_3 67 312 IPR034085 -
Vvi19g0558 938 MobiDBLite consensus disorder prediction 326 349 - -
Vvi19g0558 938 FunFam Microtubule-associated protein TORTIFOLIA1 34 156 - -
Vvi19g0558 938 SUPERFAMILY ARM repeat 46 325 IPR016024 -
Vvi19g0558 938 MobiDBLite consensus disorder prediction 1 29 - -
Vvi19g0558 938 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 30 908 IPR033337 GO:0005874|GO:0008017
Vvi19g0558 938 MobiDBLite consensus disorder prediction 370 387 - -
Vvi19g0558 938 Gene3D - 158 318 IPR011989 -
Vvi19g0558 938 MobiDBLite consensus disorder prediction 711 725 - -
Vvi19g0558 938 MobiDBLite consensus disorder prediction 441 460 - -
Vvi19g0558 938 FunFam Microtubule-associated protein TORTIFOLIA1 158 315 - -
Vvi19g0558 938 Gene3D - 20 156 IPR011989 -
Vvi19g0558 938 Coils Coil 587 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0558 Vvi-Chr19 6224950 6230859 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0558 - - vvi:100247015 1806.57