Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0551 ATGGGGATGCTTGCTGTTGAGGGTACGTATGATAAGATGAAGGCTCTTCTAAGCCAAAACATCTATCCAGTAGACATCTTATTGATGATGGCTGCCTCAGAAGGCGACAAGCCCAAAATTGAAGAGCTGTTGAGGGCTGGAGCTAGTTACACTGTCAAGGGTGCAGGTGGGTGGACTGCACTTGAAAGGGCTGCCAATGATGATGGTATGTTTGAGAGTTTCATATTACTTGGATGCTTAAAAAGGCCGCAATCAGCTATCCATTTCTTAGAGTTGACAAAGCCATGA 288 0.4514 MGMLAVEGTYDKMKALLSQNIYPVDILLMMAASEGDKPKIEELLRAGASYTVKGAGGWTALERAANDDGMFESFILLGCLKRPQSAIHFLELTKP* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0551 95 Gene3D - 3 82 IPR036770 -
Vvi19g0551 95 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 79 IPR044242 GO:0006886|GO:0009570|GO:0090391
Vvi19g0551 95 SUPERFAMILY Ankyrin repeat 4 66 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0551 Vvi-Chr19 6178875 6179162 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0551 - - vvi:100260680 119.398