Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0542 ATGGTTGATCGAGACAAAGACTGGGAGTTTCATCTGAGATCCCTCTCTGCCACCGCCAGAGACTCTAATTTCTCCGCCGACCCCGCCTCCGATCCCAATCTTCTCCCATCCGTGAGGAAGCTTTATGAATTGTGTAAATCAGAGGAATCTGAGGATTTGGTGGCTAGGGTTTATCCGCAGATCAATAAGATCTTTCAGAGATTGGTAGCTTCCGTTTCGCAGTCTCGAACCTCTAATGGCCTTCTCTTTCTGGCCATTCTTCAGTTTTTCCTTGATTTTGGTGAGATTGTTCTACATGATGCTGATCCATCTCTAAGGACATTTTTTCGATCATGCTTGAGCCGTGAGTTTGCAGACCCTGTTGTTGCAAAAGCAACGCTTGATTTTCTGATTTGGAACAAGAAGAAGATTTTAACTTCTTTCCCGACGTTACTGCCACAGTTTTTTCCATTACTGCTGAAGCTGATTGCTTGGAATGGAGAGAAATTAGAGAAATCATTTTTAAAGGTTTTCCCAGGATTAATATCTCCTGGGTCATTTCTTCCACTGTTCCCATCAGTGTTGGACTTGCCAATATTGGTAGTGGCATTGGAGAAGGTAGAACGTAGCTCCGGACCACTGATTGGTAGTAGCATAGCTTCAATTCAGAAGAGTACGGCTCCTGAGATGCTACTTGCGCTAATGGATGAAGCTTATACTGGTTCAACAATAGGAGATGGAGGAGGAGACTCTGAATCTGAGGATAGCAATGCAATAGATGTAGCTGATCCATTGTTTTTTGACCTTCTTAAAGATGAGAATGATGGCCTTGCTGAACGGCACTGGACTTCTCCTGGAATTGCTGCAGCTCTACAGGCTGCTATTAATACCCCTCAGTCTGATAGGCTTAAACAATCACTCAATATGGCACCTCGGGTTCTTGATATGTATTTTGCTATTGCATTACGTGATGTCAATAATTCTTTAATCTGCGCATTACTTCCCCTAATTATGACAAGGAATGCTACAATATTTCCCGACAAAATTTTCTCTTATGAGGTTCGAAAGAGGCTCTTAGAATTTATGCTTGCTGCATTCCAGCGATCTCCAGATTTTATTGCACTGCTGAAGAAGCCTATAATGGACAGACTTGCAGAAGCTTATGACAGCACTGCAAAGACAGAATTGGCATTGCAATTGTGTTGGGCCATTGGGGAGCATGGAGGAGGTGGTGCATCACATGGAGATGCAGCTCGTGAGCTTTTCGAGAGTTTAGAACTACTTTTGTATGAAAACCTTTCTTCTAGTCGCCTGGGCTTAAGGCAGGAGTCAGCTCTTAGCTCCGATGGTGCAACTTTCAGAAAATCATCACAGTCAAGGCTTCTATGTTTTGTTGTGACTGCTATTGCAAAGCTTGCCACATACCACCGTGAATTATTACCAAGGGCACGTGTATCTCTAGCCAAGGTAGCTCGATCTCGAATGTCTGATGCGAGGGTTTGGAGACGTGCACATGATTATTTGGGCTTAATGAATGAACCAGCAATATGTTTGTCTGTTTTGGGGCCTTCACGACCTTCTCATGGACATATGCAGAATCCAGGCACTGTCAACTGGAGTGAAGGCAGCAAAAAGATGATTGCTCATATTCCATTTTACATTTTAGGCGAACAAGAAGGCCTACCCTTCCACGATTTTTCATTCTCAGACATCCTCCCGAGAAGAAGATGA 1710 0.4363 MVDRDKDWEFHLRSLSATARDSNFSADPASDPNLLPSVRKLYELCKSEESEDLVARVYPQINKIFQRLVASVSQSRTSNGLLFLAILQFFLDFGEIVLHDADPSLRTFFRSCLSREFADPVVAKATLDFLIWNKKKILTSFPTLLPQFFPLLLKLIAWNGEKLEKSFLKVFPGLISPGSFLPLFPSVLDLPILVVALEKVERSSGPLIGSSIASIQKSTAPEMLLALMDEAYTGSTIGDGGGDSESEDSNAIDVADPLFFDLLKDENDGLAERHWTSPGIAAALQAAINTPQSDRLKQSLNMAPRVLDMYFAIALRDVNNSLICALLPLIMTRNATIFPDKIFSYEVRKRLLEFMLAAFQRSPDFIALLKKPIMDRLAEAYDSTAKTELALQLCWAIGEHGGGGASHGDAARELFESLELLLYENLSSSRLGLRQESALSSDGATFRKSSQSRLLCFVVTAIAKLATYHRELLPRARVSLAKVARSRMSDARVWRRAHDYLGLMNEPAICLSVLGPSRPSHGHMQNPGTVNWSEGSKKMIAHIPFYILGEQEGLPFHDFSFSDILPRRR* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0542 569 PANTHER AP-5 COMPLEX SUBUNIT ZETA-1 2 567 - -
Vvi19g0542 569 Pfam AP-5 complex subunit, vesicle trafficking 30 154 IPR028222 GO:0044599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0542 K19025 - vvi:100248758 1055.82