Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0538 ATGGCCGCTCGACTACTGAGGAGGAAGGCTCTCACGAATCTCTCTGCTCCTTCGTCCTCTCCCTTCTCTAAATCATCCTTCTCAGTTCAGAGACTCATTAGCACGTTGGTTTTGGGTGAGCATGAAGGGGGCTCCATCAAGGCCCAATCTTTGAGTGCAGTAGTTGCTGCAAAGTTTTTGGGTGAGGACAATTCTATTTCTATGCTGCTGGCTGGGTCTGGTCCTTCAGTTCAAGAAGCTGCTATACATGCTGCCTCATGTTATTCTTCAATTTCTCAGGTAATTGTAGCTGATTCAGATAAATTTACATATCCTGTAGCAGAACCTTGGGCAAAACTAGTCCAGTTGATTCAGCAGAAAGGTGGCTACTCACACATAATGGCTACTTCAGGTTCATTTGGAAAAAACATACTACCACGGGCAGCTGCCCTTTTAGATGTTTCTCCAATTACCGATGTCATTGAAATTTCAGGACCTCAGCTATTTGTGAGGCCAATTTATGCTGGAAATGCTCTTTGCACTGTTCGATACACTGGTTCTGCGCCTTGTATGTTGACCGTTAGGTCAACATCTTTTCCAGTGCCACTGACATCAGCTAATTCAAAATCTGATGTGGCTCCAATTTCCCAGGTTGACCCCTCAACCTTTGGTGAAGATATGGTGTGCAAATCAAAATATTTAAGCCATACCTCTCAGGATTCAGAACGTCCAGATCTCGGTAATGCTCGTATTGTGGTCACTGGGGGCCGAGCGTTGAAAAGTGCTGAAAACTTCAAAATGATTGAGAAGCTTGCAGAAAAACTTGGTGCTGCAGTTGGTGCTACTCGTGCTGCTGTTGATGCGGGATTTGTTCCTAATGAACTCCAGGTTGGTCAAACTGGAAAGATCGTGGCCCCAGAATTGTATTTGGCTTTTGGTGTTTCAGGAGCCATTCAACATTTAGCAGGCATGAGAGATTCCAAGGTTATTGTTGCTGTGAACAAGGATGCAGATGCACCCATATTTCAGGTAGCTGATTATGGACTCGTGGGTGACCTGTTTGAAGTGATACCAGAGTTGTTAGAGAAGCTTCCTGAGAAAAAATAG 1086 0.4466 MAARLLRRKALTNLSAPSSSPFSKSSFSVQRLISTLVLGEHEGGSIKAQSLSAVVAAKFLGEDNSISMLLAGSGPSVQEAAIHAASCYSSISQVIVADSDKFTYPVAEPWAKLVQLIQQKGGYSHIMATSGSFGKNILPRAAALLDVSPITDVIEISGPQLFVRPIYAGNALCTVRYTGSAPCMLTVRSTSFPVPLTSANSKSDVAPISQVDPSTFGEDMVCKSKYLSHTSQDSERPDLGNARIVVTGGRALKSAENFKMIEKLAEKLGAAVGATRAAVDAGFVPNELQVGQTGKIVAPELYLAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKLPEKK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0538 361 ProSitePatterns Electron transfer flavoprotein alpha-subunit signature. 301 327 IPR018206 -
Vvi19g0538 361 PIRSF Electra_flavoP_a 31 361 IPR001308 GO:0009055|GO:0050660
Vvi19g0538 361 PANTHER ELECTRON TRANSFER FLAVOPROTEIN ALPHA 32 358 IPR001308 GO:0009055|GO:0050660
Vvi19g0538 361 SMART ETF_2 35 220 IPR014730 -
Vvi19g0538 361 SUPERFAMILY DHS-like NAD/FAD-binding domain 235 357 IPR029035 -
Vvi19g0538 361 Pfam Electron transfer flavoprotein domain 35 212 IPR014730 -
Vvi19g0538 361 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 34 209 - -
Vvi19g0538 361 Gene3D - 235 360 - -
Vvi19g0538 361 FunFam Electron transfer flavoprotein subunit alpha, mitochondrial 34 230 - -
Vvi19g0538 361 Gene3D HUPs 34 234 IPR014729 -
Vvi19g0538 361 Pfam Electron transfer flavoprotein FAD-binding domain 238 318 IPR014731 -
Vvi19g0538 361 CDD ETF_alpha 34 212 IPR033947 -
Vvi19g0538 361 FunFam Electron transfer flavoprotein, alpha subunit 232 361 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0538 K03522 - vvi:100243622 680.633