Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0522 ATGGAATCAGAGCCACCATTTGGGGAGTTCGTCAACAGTGTTTTTGGAAACATTGTAGAACAAGAGGAAACTGAAGCAAAGTTCGACGTGGATGAATGTGAACTACCGCTGATTGACCTAGGTCACTTGAATCTTGGCAACTTGGAGCATGAAGAGTGCAAGAGAAAGATTTGTGAAGCTTCTACTGAATGGGGCTTCTTCCAGATTGTCAACCATGGCGTTTCTAAAGAGATTTTGTCCAGGATTCATCGTGAGCAAGTGGAGTTGTTCCGGCAGCCATTCCAGATAAAGACTAATGAGAAGTTGCTGAACTTATCATCTGGCTGTTACCGCTGGGGAACGCAAACTGCTATTACTCAGAAGCAATTCGCATGGTCTGAAGCTTTTCACATCCCGCTTTCCACTATTTTCCAACTAAGTGAATTCGAAGGTCTCAGGTCAAGTCTTCAAGAGTTTGCAATTAAAGCTTCGGATCTCGCTCAACAAATAGCTAAAATATTGGCTGAGAATTTGGGCTGTAAATCCACTTTCTTTTTCAAGAATTGCTTGCCAAGTTCATGTTATATTCGAATGAACAGATATCCAGCATGTCCGGTGTCGTCTAAGGTTTTTGGATTAATCCCGCACACTGATAGTGACTTCCTCACAGTATTGCATCAAGATCAGGTGGGGGGATTGCAGCTCCTAAAAGATGGAAAATGGATTAGGGTTAAGCCTAATCCAGATGCTCTAGTTATCAACATTGGAGACTTATTTCAGGCTTGGAGCAATGGAGTTTATAAGAGTCTTGAACACCGAGTTGTTGCCAACCATGAAATTGAAAGGTTCTCTTTTGCATACTTCCTCTGTCCCTCTCATGACACCGTGATACAAAGTTGCTGTGAGCCTTCAATCTACAGAAAATTTAGCTTCAGAGAGTACAGACAGCAAGTTGAAGAGGATGTGAAGACCACAGGGGACAAGGTAGGGCTTTCAAGATTTCGCAGATGA 990 0.4273 MESEPPFGEFVNSVFGNIVEQEETEAKFDVDECELPLIDLGHLNLGNLEHEECKRKICEASTEWGFFQIVNHGVSKEILSRIHREQVELFRQPFQIKTNEKLLNLSSGCYRWGTQTAITQKQFAWSEAFHIPLSTIFQLSEFEGLRSSLQEFAIKASDLAQQIAKILAENLGCKSTFFFKNCLPSSCYIRMNRYPACPVSSKVFGLIPHTDSDFLTVLHQDQVGGLQLLKDGKWIRVKPNPDALVINIGDLFQAWSNGVYKSLEHRVVANHEIERFSFAYFLCPSHDTVIQSCCEPSIYRKFSFREYRQQVEEDVKTTGDKVGLSRFRR* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0522 329 Gene3D - 10 316 IPR027443 -
Vvi19g0522 329 Pfam non-haem dioxygenase in morphine synthesis N-terminal 35 131 IPR026992 -
Vvi19g0522 329 SUPERFAMILY Clavaminate synthase-like 27 310 - -
Vvi19g0522 329 FunFam Gibberellin 2-beta-dioxygenase 8 33 321 - -
Vvi19g0522 329 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 183 284 IPR005123 -
Vvi19g0522 329 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 35 310 - -
Vvi19g0522 329 Pfam 2OG-Fe(II) oxygenase superfamily 190 284 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0522 Vvi-Chr19 5864698 5866734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0522 25 309 Glycosyltransferase AT5G59530 30.897 8.77e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0522 - K04125 vvi:100258946 677.167