Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0521 ATGCAGTCCCTTCACGGGTTATACTCTTACGTGTTACTTTCCCACAAAAGTCACCTTTCATTATTTGGGTTGGTGCGGTTGGGACGTGATCTGTTGGTCAATCATGGTATTTCTTCGGATATTGTGGCATGGTTGCGCTCTGAGCAAGTGAAGTTATTCCGGCAGCCCTTCAACAAAAAGGCCAATGAGAAGTTGTTGAACTTACCATCAGGCAATTACCGCTGGGGAACACAAACTGCAAGCACTCTCATGCAATTCTCATGGTCTGAAGCCTTTCACATACCCCTTGTCGATATGCAGGAACAGAGTGAAATCAGCTGCCTCAGGTCAACAATTGACGAGCTTGCAGTAAAGGTTTTTGAGCTGGCTCAACAGATAGCTCAAATTTTGGTGGAAAATTTGAGTGGTAAATCCACTTTCTTTGCGGAGAATTGCTTGCCAAGTTCATGTTTTCTCCGAATGAACAGATACCCACCATGTCTAGTATCTCCCAATGTATTCAGAATAGTTCCGCATACTGACAGTGACTTCCTCACTATATTGCATCAAGATGAGGTAGGAAGATTGCAGATCATTAAAGATGGAAAATGGATTGGAGTTATGCCCAATCCAGAAGCTCTAATTATAAACATCCTACAATATGGTCATTTTCCATTAGTTTGGAACAACTGA 672 0.4241 MQSLHGLYSYVLLSHKSHLSLFGLVRLGRDLLVNHGISSDIVAWLRSEQVKLFRQPFNKKANEKLLNLPSGNYRWGTQTASTLMQFSWSEAFHIPLVDMQEQSEISCLRSTIDELAVKVFELAQQIAQILVENLSGKSTFFAENCLPSSCFLRMNRYPPCLVSPNVFRIVPHTDSDFLTILHQDEVGRLQIIKDGKWIGVMPNPEALIINILQYGHFPLVWNN* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0521 223 Pfam 2OG-Fe(II) oxygenase superfamily 152 211 IPR044861 -
Vvi19g0521 223 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 146 223 IPR005123 -
Vvi19g0521 223 Gene3D - 22 214 IPR027443 -
Vvi19g0521 223 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 32 211 - -
Vvi19g0521 223 SUPERFAMILY Clavaminate synthase-like 26 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0521 Vvi-Chr19 5852014 5864139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0521 32 211 Glycosyltransferase AT5G59530 25.000 2.18e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0521 - K04125 vvi:100258946 252.677