Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0511 ATGGCCGGCGCTCTTATCTTAATGGCAACCCTGATTGCAACGGTCACATTTGCTGCGGCATTCACCATTCCTGGGGGCTTCCAAGCTGAAGATCCACATAAAGGCATGGTGGTGTTAGGTAGGAATATGGCTTTTAGAACCTTCATCATCACCGACACAATAGCTATGACTTCATCCATGATGGCTGCACTGATCCTAATCATCATGCCGTTCCAGACTGATGAGGAAATTATAAAGAGTTTTCTTGGATACTCCCTACTACTGTTATGGCTGGCACTTATGGCAAAGGGAATAGCATTCGTGACGGGTCTGTATGCTGTTTTGTCAGAGCAGTTGCCTCTTGCTATCGTGGTTTGTTGCATTGGCTGTATTTTACCGCTAATAATCTATTATGGCCCTACTCTTCTTGTGGTCCCTCAATTGAAAGAATCTTAG 435 0.4483 MAGALILMATLIATVTFAAAFTIPGGFQAEDPHKGMVVLGRNMAFRTFIITDTIAMTSSMMAALILIIMPFQTDEEIIKSFLGYSLLLLWLALMAKGIAFVTGLYAVLSEQLPLAIVVCCIGCILPLIIYYGPTLLVVPQLKES* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0511 144 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 4 142 - -
Vvi19g0511 144 Pfam Domain of unknown function 3 107 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0511 Vvi-Chr19 5728070 5728504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0511 3 103 Miscellaneous Gene Families AT1G34050 33.333 2.53e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0511 - - vri:117909548 239.58