Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0507 ATGGATGATTTTGGGAGCAAGTTGATACGGGTAACCCAGAATGACAACGTGTTTGAAGTGGAAGACATCCTCACCAACATTCTCTCAAGGCTTCCTGTTAAATCCCTCTTGATATGCAAGTCCGTTTCTAAATATTGGCGGGATTTAATTTGCAGTCCTAGTTTTATGCATTCGCATCTAGTCCAATCTCGAGAAAATTCAAGTTATGCTTTCTATCCTTCTTATCCCTCTTGGGACGACAACATACCTTTGCTCACCAAAACTGATGGAGAAACCACTCAAAGTTTCCTTGATTGTGATGGGTTTTACTTTGAAGGTATGGTTTGTTCCTTTAATGGTTTGATCTGTTGCACTAACTTCCACGGCCCTTTTGTTTATGAAAGGATTGAAGATAGTAATACCTTTGACATACATATTTGTAACCCTGCCACCCGAGAAGTCCTGTTACTCCCACCAACCCCCACATCAGAATATATACCCAAGATTGGTGTTTCTTTTGGCCCCACACTCAATGAATATAAAGTATTTCAGTTTTACTACAGAGACGAGCAACTTTATGAATGCAAGGTATATTCTTCCATCGTTGGATCCTGGAAATCTATGGGTACTGTTCCATACAGTCCCTATACTTCTTCCAATCATGTATGTATTAATGAAACGGTGTTCTGGTTTAGCTTATCAATGATAGACGGGCGGCTGGTCGGCCACATCCTTGCAGTTGATAAGGAGGAAAATTTTAGCACAATTAGGATTCCAGAGGAAGAAACTATGCGCCCTTTCTTGGTGAATCTTGAAGGTTGTTTGTGTCTGGTGGCTCGACATGGACTTGGCCAACTTGATATATGGGCTTTACAGGATAGTAAGGAGTCAGTTTGGATGAAGAAATGGAGTGATAATATCCCCCAAAATTTTAATATTCAAGGACTTAGCTATGTAACTGTGCAAAAGAATGAAATTCTTCTTGCAAATTGGGTACGTTCTGTTTTCTATAACATGGAGACCAGAACTTGGAGAGAATTCAACTGGGAACATGCTCATGAAGACAAGTTTTCTCTTCCAATGGCATACACAGAGAGCCTCCTCCCATGCAAGTATTGA 1098 0.4044 MDDFGSKLIRVTQNDNVFEVEDILTNILSRLPVKSLLICKSVSKYWRDLICSPSFMHSHLVQSRENSSYAFYPSYPSWDDNIPLLTKTDGETTQSFLDCDGFYFEGMVCSFNGLICCTNFHGPFVYERIEDSNTFDIHICNPATREVLLLPPTPTSEYIPKIGVSFGPTLNEYKVFQFYYRDEQLYECKVYSSIVGSWKSMGTVPYSPYTSSNHVCINETVFWFSLSMIDGRLVGHILAVDKEENFSTIRIPEEETMRPFLVNLEGCLCLVARHGLGQLDIWALQDSKESVWMKKWSDNIPQNFNIQGLSYVTVQKNEILLANWVRSVFYNMETRTWREFNWEHAHEDKFSLPMAYTESLLPCKY* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0507 365 PANTHER BNAA05G37150D PROTEIN-RELATED 21 348 - -
Vvi19g0507 365 Gene3D - 20 58 - -
Vvi19g0507 365 Pfam F-box domain 21 55 IPR001810 GO:0005515
Vvi19g0507 365 NCBIfam F-box protein interaction domain 111 330 IPR017451 -
Vvi19g0507 365 SMART fbox_2 21 59 IPR001810 GO:0005515
Vvi19g0507 365 SUPERFAMILY F-box domain 21 73 IPR036047 GO:0005515
Vvi19g0507 365 CDD F-box_AtFBW1-like 21 55 - -
Vvi19g0507 365 Pfam F-box associated domain 242 321 IPR013187 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0507 Vvi-Chr19 5663994 5665091 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0507 - - vri:117908099 743.421