Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0498 ATGGAATTTGTGATTGCATGCCTGAGTTCAGCAGTATCATCGTTTTCTGAACATCTTTGTGGCTTCATCTGCTCCAAAGTTGGGAATCCCTTCACCTTCAAGTCTAATTATAGTCATCTGCAACAGGAGCTGCAACGTCTAAACGATCTGAAATCCAGAGTGGAAAGGGACCACGATGAATCGGTTCCAGGAGTAAATGACTGGTCGAGAAATGTTGAAGAAACTGGCTGTAAAGTGAGATCGATGCAAGCAAAGATAGATGCCAACAAAGAGAGGTGTTGTGGTGGCTTCAAAAATCTCTTTTTGCAAAGCAGGGGAGTGGCAGAGGCACTGAAGGAGGTACGAGGGCTTGAGGTACGAGGAAATTATCTTGAGGATTTGCTGGCTGCCAGTCGTCAAGCAAGAGCAGTGGAGCTTATGCCTGTGGAATCAATTGTTCATCAACCCGCAGCATCCCAAAATTTAGCCACAATTATGAATCTGCTGAATGATGATGCAGTTAGAACAATTGGAGTTTGGGGTCAGGGAGGAATAGGCAAAACTACTCTGGTTAAGAATTTGAATAACATGCTTAAGGATGCTTCTTCAACTACTCCACCTTTTAGCATTGTCATATGGATCACCCTGTCCAGGGAGTGGGACCTCAATAGCATCCGGGTACAAATCTCTCAGAGATTGGAAATGAAAGAGAAAACCAACGAAAGTCCGGACAGTCTGGCTGCTAGAATCTGTGAAAGACTGAAGAAGGAAGTAAAGTTTCTCCTCCTTCTGGATGATGTTTGGAAGGAAATTGATTTGGATGCTTTGGGTATTCCCCGACCTGAAGACCACGCGGCTTGTAAAATCATATTGACAACCAGATTTTTAGATGTTTGCCGGGGGATGAAGACAGACAAAGAGGTTGTCATTCATGTCCTGAACGATGATGAAGCGTGGAAACTGTTCTGTAAAAGTGCAGGGGAGGAAGCCAATTTAGAAGATGTTGAACCAGTTGCGAGGGCAATAACTAAAGAATGTGGAGGACTGCCCTTAGCAATAAATGTGATGGGAACATCCATGAGAAAGAAGACTAATAAACACCTCTGGATGAATGCATTGAAGGAGCTGCAAAAGTCGGTGCCGTATAACATCCCCGGGGTTGAGGATAAGGTTTACAAGTCTTTGAAGTGGAGTTATGATTCCTTGCAAGGTAATAATATCCGATCCTGCTTTTTGTACTGCTCTTTATATCCTGAGGATTTCTCAATTGATATAAGCCAACTCGTACAATGCTGGCTGGCGGAAGGCCTTTTAGATGTAGATGAACAACAAAGCTACGAGGATATCTACAATAATGGAGTTGCTTTAGTAGAAAATCTCAAGGATTGTTGTTTGCTGGAAAATGGTGATGATGACAGAAGCGGCACTGTGAAGATGCATGATGTAGTTCGTGATGTCGCGATTTGGATTGCATCCTCCTCAGAGGATGAATGTAAATCTCTTGTTCAATCCGGAATTGGATTGAGGAAATTCCCAGAGTCCAGATTGACACCATCTTTGAAGAGAATTTCTTTCATGAGAAATAAAATAACATGGCTGCCAGATAGTCAGAGCTCGGAGGCCTCCACTTTGCTTTTACAAAATAATTACGAACTTAAGATGGTTCCTGAGGCATTCCTGCTCGGATTTCAAGCACTCAGGGTCTTGAATCTAAGTAATACCAACATCCGCCTCAAAAAATTACCCCCTGTGGGGCGGCTTAGTAAACTACAAGTGCTGGATTGCAGTAATAGTGGTATCCTGAAATTGCCAGAAGGGATGGAGCAGTTGAGCAACTTACGGGAATTAAACTTGTCAGGCACTAAGGAGTTGAAAACCTTCCGAACTGGATTGGTATCAAGGCTGTCTGGTTTAGAGATTCTGGACATGAGTAACAGTAACTGTAGATGGTGTCTGAAGACAGAGACAAACGAGGGAAACACAGCACTACTTGAGGAGCTAGGATGTCTGGAGCGATTAATTGTTTTAATGGTGGACTTGAATGGCACCACACATCCCTCTTCGGAATATGCTCCTTGGATGGAAAGGTTGAAAAGCTTCAGAATTAGGGTACATGGAGTTCATGGCCGAATTTCTCCTTTAGGCTTCAAGATTTTCAGACAGGTTAAAAAAAATCTACTCAAGAACAAAGATGCAAAATTTGAGGAAAGAAAGCTTTTACTTTCGGGATTGGATCTGTCAGGCAAATTGAATGGATGCTTGTTAACATGTGCAGCCGTTCTTGAACTGGAAGGTTGCAAGGGGTTAAATAATCTGTTTGATAGTGTTGGTGGCTTTGTTTATCTCAAGTCACTTTCTATTTCGTCTTCCAACGTCAGGTTCAAGCCAACAAGAAGACATCGTTCCCCAAATGACCTACTTCCAAATCTAGAGGAACTTAACCTCGTGGATCTCCTTAGCCTAGAGAGCATTTCAGAATTAGTTGGGAGTCTTGGACTCAAATTTTCAAGGCTAAAAGTAATGACGGTGCTCTGTTGTTCGAAACTAAAATATCTTCTCTCTTGTGATGATTTTACTCAACCCTTGGAAAAGCTGGAAACAATTTGCTTACGATACTGTCCCGATTTGAGTGATATGTTCATTTACAGTTCAGGGCAGACCTCAAAGTCATATCCTGTTGCTCCAAACTTGAGGGAAATATACTTATCAAGCCTTCCCAAATTGAAGACTTTAAGCAGACAAGAAGAAACATGGCAACATCTAGAGTATATTTATGTGGAAGAGTGTAAAAGTCTGAAGAAGCTACCTTTGAATGAGCAAAGTGCAAATACTTTGAAAGAGATAAGAGGAGAGGAGGAGTGGTGGAAGCAATTGGAGTGGGATGATGATGTTACCAGCTCCACTCTCCAGCCTCTTTTCAAAGGTCCAGAGTGGTGGCCCTGA 2922 0.4251 MEFVIACLSSAVSSFSEHLCGFICSKVGNPFTFKSNYSHLQQELQRLNDLKSRVERDHDESVPGVNDWSRNVEETGCKVRSMQAKIDANKERCCGGFKNLFLQSRGVAEALKEVRGLEVRGNYLEDLLAASRQARAVELMPVESIVHQPAASQNLATIMNLLNDDAVRTIGVWGQGGIGKTTLVKNLNNMLKDASSTTPPFSIVIWITLSREWDLNSIRVQISQRLEMKEKTNESPDSLAARICERLKKEVKFLLLLDDVWKEIDLDALGIPRPEDHAACKIILTTRFLDVCRGMKTDKEVVIHVLNDDEAWKLFCKSAGEEANLEDVEPVARAITKECGGLPLAINVMGTSMRKKTNKHLWMNALKELQKSVPYNIPGVEDKVYKSLKWSYDSLQGNNIRSCFLYCSLYPEDFSIDISQLVQCWLAEGLLDVDEQQSYEDIYNNGVALVENLKDCCLLENGDDDRSGTVKMHDVVRDVAIWIASSSEDECKSLVQSGIGLRKFPESRLTPSLKRISFMRNKITWLPDSQSSEASTLLLQNNYELKMVPEAFLLGFQALRVLNLSNTNIRLKKLPPVGRLSKLQVLDCSNSGILKLPEGMEQLSNLRELNLSGTKELKTFRTGLVSRLSGLEILDMSNSNCRWCLKTETNEGNTALLEELGCLERLIVLMVDLNGTTHPSSEYAPWMERLKSFRIRVHGVHGRISPLGFKIFRQVKKNLLKNKDAKFEERKLLLSGLDLSGKLNGCLLTCAAVLELEGCKGLNNLFDSVGGFVYLKSLSISSSNVRFKPTRRHRSPNDLLPNLEELNLVDLLSLESISELVGSLGLKFSRLKVMTVLCCSKLKYLLSCDDFTQPLEKLETICLRYCPDLSDMFIYSSGQTSKSYPVAPNLREIYLSSLPKLKTLSRQEETWQHLEYIYVEECKSLKKLPLNEQSANTLKEIRGEEEWWKQLEWDDDVTSSTLQPLFKGPEWWP* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0498 973 PRINTS Disease resistance protein signature 339 353 - -
Vvi19g0498 973 PRINTS Disease resistance protein signature 247 261 - -
Vvi19g0498 973 PRINTS Disease resistance protein signature 169 184 - -
Vvi19g0498 973 PRINTS Disease resistance protein signature 601 617 - -
Vvi19g0498 973 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 38 929 - -
Vvi19g0498 973 SUPERFAMILY L domain-like 468 941 - -
Vvi19g0498 973 Gene3D Ribonuclease Inhibitor 484 728 IPR032675 -
Vvi19g0498 973 Gene3D Ribonuclease Inhibitor 730 951 IPR032675 -
Vvi19g0498 973 FunFam Probable disease resistance protein At1g61300 129 300 - -
Vvi19g0498 973 Coils Coil 37 60 - -
Vvi19g0498 973 Gene3D - 306 390 IPR042197 -
Vvi19g0498 973 Pfam NB-ARC domain 160 393 IPR002182 GO:0043531
Vvi19g0498 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 407 IPR027417 -
Vvi19g0498 973 FunFam Probable disease resistance protein At1g63360 392 482 - -
Vvi19g0498 973 Gene3D - 391 481 IPR036388 -
Vvi19g0498 973 Gene3D - 131 304 IPR027417 -
Vvi19g0498 973 FunFam Probable disease resistance protein At5g66910 305 391 - -
Vvi19g0498 973 SMART AAA_5 166 307 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0498 Vvi-Chr19 5444319 5447306 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0498 547 637 Receptor kinase-like Gene Family AT2G33060 39.785 3.54e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0498 K13459 - vvi:100260669 1554.65