Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0493 ATGCAGCTCCACATATCGCCCAGTTTGCGGCATGTAACTGTGCTGCCTGGGAAAGGAGTGAGGGAATTCATCAAAGTGAAGGTTGGTTCGAGGCGGGTTTCGTATAGGATGGTGTTTTACTCCCTTCTCTTCTTCACATTTCTTCTGAGGTTCGTCTTCGTTTTGACAGCAGTGGACACCATTGACGGGGAAACCAAGTGCTCTACCATAGGTTGCTTGGGGAAAAGACTAGGACCGAGGATTTTGGGAGGAAGGCATGAATCACCTGTCCCAGAAGTGATGTATCAAATACTAGATGAACCTGCAAGTAAAGATGAAATTCAAGGGAGGGATGATATCCCTCAGACGTTGGAAGAGTTCACGGCTGAAGTGAAGGAAAGCAGATCAGATGCAAGGGCATTTGCTATTAAACTTAGAGCCATGGTGACACTGCTTGAACAAAGGACAAGAACGGCTAAAATCCAAGAATACCTATACAGGCATGTGGCGTCCAGCAGCATACCAAAGCAGCTCCACTGCCTTGCTCTAAGACTAGCCAACGAGCACTCAACCAATGCCAACGCCCGCCTCCAGCTCCCCTCTGCAGAGCTCGTCCCCTATCTCGTTGATAACTCCTACTTCCACTTTGTCCTCGCCTCTGATAATATCCTTGCTGCCTCTGTTGTGGCCTCATCTCTCATACGCAATGCGCTACGCCCCCATAAAGTTGTTCTACACATTATCACAGACAGGAAAACTTACTCCCCCATGCAGGCATGGTTCTCTTTGCACCCTTTATCGCCTGCGATAATTGAGGTCAAGGGGCTGCATCACTTTGATTGGTTTACAAAAGGAAAGGTCCCGGTTTTGGAAGCTATGGAGAAGGATCAGCGCGTAAGGTCTCAGTTTAGAGGCGGGTCTTCAGCCATTGTGGCAAATAATACTGAGAAACCTTATGTCATTGCAGCAAAGTTGCAAGCTCTTAGTCCGAAGTATAATTCAGTGATGAATCACATCAGGATACATCTACCTGAGTTGTTTCCTAGTCTTAACAAGATAGTGTTCCTCGACGATGACATCGTGGTTCAAACTGATCTTACACCTCTGTGGGACATTGACATGGAAGGGAAAGTGAATGGTGCAGTGGAAACTTGTCGGGGAGATGATAAATTTGTTATGTCCAAGAGGCTGAAGAGCTATTTGAACTTCTCACATCCTTTGATAGCAAAGAATTTTGATCCAAATGAATGTGCTTGGGCTTACGGCATGAACATATTTGACCTAGAGGCTTGGAGGAAGACCAACATAAGCCGCACATACCATAGCTGGCTTCAAGAGAACTTGAAATCAGACCTCAGTTTGTGGCAATTGGGCACATTACCACCAGGCCTAATAGCATTCCATGGCCATGTACACGTTATAGATCCCTTCTGGCACATGCTGGGACTAGGGTACCAAGACAATACAAGTCTAGCAGATGCTGAAAGCGCCGGGGTGGTCCATTTTAATGGAAGAGCGAAGCCATGGCTTGAGATCGCGTTCCCACAGCTAAGGCCACTGTGGGCAAAGTATGTCGACTTCTCTGACAAATTCATCAAGAGTTGTCACATTAGGGCATCTTGA 1602 0.4682 MQLHISPSLRHVTVLPGKGVREFIKVKVGSRRVSYRMVFYSLLFFTFLLRFVFVLTAVDTIDGETKCSTIGCLGKRLGPRILGGRHESPVPEVMYQILDEPASKDEIQGRDDIPQTLEEFTAEVKESRSDARAFAIKLRAMVTLLEQRTRTAKIQEYLYRHVASSSIPKQLHCLALRLANEHSTNANARLQLPSAELVPYLVDNSYFHFVLASDNILAASVVASSLIRNALRPHKVVLHIITDRKTYSPMQAWFSLHPLSPAIIEVKGLHHFDWFTKGKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKPYVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKIVFLDDDIVVQTDLTPLWDIDMEGKVNGAVETCRGDDKFVMSKRLKSYLNFSHPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISRTYHSWLQENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQDNTSLADAESAGVVHFNGRAKPWLEIAFPQLRPLWAKYVDFSDKFIKSCHIRAS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0493 533 CDD GT8_like_1 207 519 - -
Vvi19g0493 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
Vvi19g0493 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 525 IPR029044 -
Vvi19g0493 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 98 530 IPR029993 GO:0047262
Vvi19g0493 533 Pfam Glycosyl transferase family 8 199 506 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0493 Vvi-Chr19 5411582 5414544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0493 1 533 Glycosyltransferase AT5G54690 82.804 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0493 K20867 - vvi:100264056 1057.74