Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0488 ATGGCTCACTTAGCAAATTTACATGGAGCCTCTGAGACCCTACCATCCATCTTTAAGCTTAGGGGCGATCTCCGAAGGACCAGAAAAAGAGTGACCATAATTGGATTTCTTTGCAAGAAAGCTGAGCAGATTCAAGAACAATCATTCCAAGCTACAAGAAGATCAGCTCTAGGCCTGTCCTCAATAGCCATTCTTGGGAATTCTGGGATTGGCCCTGCTCTTGCTGAGGACAATGGATACTGGCTCACAGGCCCTTTACCGGTCCCAACGGTCGATAACGACATCGTGAATAAGGAGACTGGCACTCGTTCTTTTCTCAAGAAAGGACTGTATATTGCGGATGTGGGAACTAAAGGGAGAATGTTGAGGCTAAAGAAATATGCATTTGATCTCATAGCATTGGAGGACTTGATGGACAAAGATGCCTGGAACTATTTTACGAAGTACCTGCGCCTTAAGTCCACCTTCATGTACTATGATTTTGATAAATTAATCTCTGCAGTGCCGGTTGACGAGAAGCAGCCTCTCACTGATCTGGCGAACAGATTGTTCGACTGTGTGGAAAAGCTTGAAGATGCTGTGAAGATTCGTGATATTTCCCAGACGGAATCACGCTACAAAGACACGAAGACTGTTCTCCAAGAGGTCATGGATAGGATGGCATAA 666 0.4505 MAHLANLHGASETLPSIFKLRGDLRRTRKRVTIIGFLCKKAEQIQEQSFQATRRSALGLSSIAILGNSGIGPALAEDNGYWLTGPLPVPTVDNDIVNKETGTRSFLKKGLYIADVGTKGRMLRLKKYAFDLIALEDLMDKDAWNYFTKYLRLKSTFMYYDFDKLISAVPVDEKQPLTDLANRLFDCVEKLEDAVKIRDISQTESRYKDTKTVLQEVMDRMA* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0488 221 Gene3D - 83 221 IPR023222 -
Vvi19g0488 221 FunFam Photosynthetic NDH subunit of lumenal location 3, chloroplastic 83 221 - -
Vvi19g0488 221 SUPERFAMILY Oxygen-evolving enhancer protein 3, 111 221 IPR023222 -
Vvi19g0488 221 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 40 221 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vvi19g0488 221 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 26 221 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0488 K08901 - vvi:100253736 439.113