Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0487 ATGGCCTCCAAAAACCAGAACAAACCTCCAATCCCTAACTTCACCAACGCTCCCGCAAGCCCTTCAAACAACCAGCCTGTTGTCGATGAGGTTGCTGTAGATAAGCGACGAAAGATCGGACTTGGGAAAATGGTGGGACCGGCGAACAGCGGCAGAACTCGGCAAGCATTTTCGGTGGTGAATGGCGGTCAGGAGAATGGCGGCCCTCCAAGTAGTGCGGGGTCGGAATGTGGAGGCATCGAGTTTACTAAGGAGGATGTTGAGGCATTGTTGAATGAGAAAATGAAGGGCAAGAACAAGTTCAATTTGAAGGAGAAATGTGATCAAATGATGGACTATATTAGAAAGCTTAGGCTTTGCATCAAATGGTTCCAAGAGCTTGAAGGAAGCTATCTCTTAGAGCAGGAGAAGCTACGGAATATGTTAGATTGTGCAGAGAGAAAATGCAATGAATTGGAGGTGCTAATGAAAAACAAAGAAGAGGAGCTGAATTCCATTATAATGGAGTTGAGGAAGAATTGTGCATCCCTACATGAGAAATTGACGAAGGAAGAATCGGAAAAGTTGGCTGCAATGGACTCTCTAACAAGAGAAAAAGAGGCTAGGCTTGCTGCTGAGAGATTACAAACTTCTCTCACAGATGAGCTCGGAAAAGCTCAACGAGAGCACTTAAGTGCTAGTCAGAAGATAACATCTCTTAATGATATGTACAAGAGATTACAAGAGTACAACACAAGTTTACAGCAATACAATAGTAAACTTCAGACAGAGCTTCCCACAGTGAATGAAGCTCTTAAACGTGTGGAGAAAGAGAAAGCTGCTGTAGTAGAGAACCTCAGCACTTTAAGAGGTCACTATAATGCATTGCAGGATCAGTTCACTTTGACCAGAGCTTCTCAAGATGAGGCTATGAAGCAAAGAGAAGCTTTGGTGAATGATGTTGTGTGCTTAAGGGGGGAGTTGCAACAGGCAAGAGATGATCGTGATCGCTATTTGTCACAAGTGGAAGTTTTAACAACTGAAGTAGTGAAGTATAAGGAATGTACTGGGAAATCCTTTGCTGAGTTGGAAAACCTATCACTAAAATCAAATGAGCTGGAGGCAAGATGTTTGTCACAAAGTGACCAGATAAAAGCATTGCAAGACAAGCTAGGAGCTGCAGAGAAGAAATTACAGGTGTCGGATTTGTCTGCAATGGAGACAAGAACTGAATATGAAGAGCAAAAGAAATTGATTCATGACTTACAAAATCGCCTGGCTGATGCAGAGATTAAAATTATTGAAGGAGAGAAGCTACGTAAAAAGTTGCATAATACTATTTTGGAACTTAAAGGAAACATCCGTGTATTCTGTAGAGTGCGGCCTCTATTGGCAGATGACTCTGCTGCAGAAGCAAAGGTCATTTCTTATCCCACTTCAACAGAGTTTTTTGGGCGGGGCATCGATTTAATGCAAAGTGGCCAAAAGCATTCGTTCACCTTCGACAAAGTGTTTATGCCTGATGCACCGCAACAGGAAGTCTTTGTAGAAATCTCACAGCTTGTACAGAGTGCTCTGGATGGTTATAAGGTATGTATTTTTGCATATGGTCAGACAGGCTCAGGTAAGACTCATACCATGATGGGCAGGCCAGGAAACCCAGAGCAAAAAGGGTTGATACCTCGCTCTCTAGAACAGATATTTGAGACCAGACAGTCTCTTAAATCCCAAGGATGGAAATATGAAATGCAGGTTTCAATGTTGGAAATATATAATGAAACAATTCGTGATTTGTTATCAACAAATCGATCCTGCTCTGATGTCTCACGAACAGAAAATGGTGTTGCTGGAAAGCAGTATGCAATCAAACACGATGGAAATGGCAATACTCATGTTTCTGATCTTACTGTTGTGGATGTTCGCAGCACTAGAGAAGTTTCATTTCTTCTAGATCAGGCTGCACAAAGCAGGTCTGTGGGCAAAACACAGATGAATGAGCAATCATCCAGAAGTCATTTTGTGTTCACTCTGCGGATATCTGGTGTTAATGAGAGCACTGAACAACAAGTACAAGGTGTTTTGAACCTTATTGATCTTGCGGGCAGTGAACGACTTTCTAAGAGTGGATCAACAGGGGACCGTTTGAAAGAAACCCAAGCCATCAATAAGAGTCTGTCATCATTAAGTGATGTTATATTTGCCCTGGCAAAGAAGGAGGACCATGTACCATTTAGGAACTCAAAGCTTACGTATCTTCTTCAGCCTTGTTTAGGTGGGGACTCCAAGACCTTGATGTTTGTGAACATCTCTCCTGATCCTTCCTCATTGGGAGAGTCGCTTTGCTCCCTACGTTTCGCAGCCAGGGTTAATGCTTGTGAGATTGGGATTCCTAGACGTCAAACAAACATGCGGCCATCAGATTCTCGCCTGAGCTATGGCTGA 2421 0.4287 MASKNQNKPPIPNFTNAPASPSNNQPVVDEVAVDKRRKIGLGKMVGPANSGRTRQAFSVVNGGQENGGPPSSAGSECGGIEFTKEDVEALLNEKMKGKNKFNLKEKCDQMMDYIRKLRLCIKWFQELEGSYLLEQEKLRNMLDCAERKCNELEVLMKNKEEELNSIIMELRKNCASLHEKLTKEESEKLAAMDSLTREKEARLAAERLQTSLTDELGKAQREHLSASQKITSLNDMYKRLQEYNTSLQQYNSKLQTELPTVNEALKRVEKEKAAVVENLSTLRGHYNALQDQFTLTRASQDEAMKQREALVNDVVCLRGELQQARDDRDRYLSQVEVLTTEVVKYKECTGKSFAELENLSLKSNELEARCLSQSDQIKALQDKLGAAEKKLQVSDLSAMETRTEYEEQKKLIHDLQNRLADAEIKIIEGEKLRKKLHNTILELKGNIRVFCRVRPLLADDSAAEAKVISYPTSTEFFGRGIDLMQSGQKHSFTFDKVFMPDAPQQEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTHTMMGRPGNPEQKGLIPRSLEQIFETRQSLKSQGWKYEMQVSMLEIYNETIRDLLSTNRSCSDVSRTENGVAGKQYAIKHDGNGNTHVSDLTVVDVRSTREVSFLLDQAAQSRSVGKTQMNEQSSRSHFVFTLRISGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSLGESLCSLRFAARVNACEIGIPRRQTNMRPSDSRLSYG* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0487 806 ProSitePatterns Kinesin motor domain signature. 685 696 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi19g0487 806 PANTHER KINESIN-LIKE PROTEIN KLP-3 84 793 IPR027640 GO:0003777|GO:0007018
Vvi19g0487 806 Pfam Kinesin motor domain 452 783 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0487 806 Coils Coil 398 432 - -
Vvi19g0487 806 SMART kinesin_4 444 793 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0487 806 Coils Coil 363 383 - -
Vvi19g0487 806 MobiDBLite consensus disorder prediction 1 27 - -
Vvi19g0487 806 Gene3D Kinesin motor domain 386 787 IPR036961 -
Vvi19g0487 806 MobiDBLite consensus disorder prediction 1 29 - -
Vvi19g0487 806 FunFam Kinesin-like protein 392 787 - -
Vvi19g0487 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 404 783 IPR027417 -
Vvi19g0487 806 ProSiteProfiles Kinesin motor domain profile. 446 785 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0487 806 PRINTS Kinesin heavy chain signature 686 704 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0487 806 PRINTS Kinesin heavy chain signature 521 542 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0487 806 PRINTS Kinesin heavy chain signature 735 756 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0487 806 PRINTS Kinesin heavy chain signature 655 672 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0487 806 Coils Coil 307 341 - -
Vvi19g0487 806 Coils Coil 233 271 - -
Vvi19g0487 806 Coils Coil 135 187 - -
Vvi19g0487 806 MobiDBLite consensus disorder prediction 59 78 - -
Vvi19g0487 806 CDD KISc_C_terminal 444 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0487 Vvi-Chr19 5386826 5394237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0487 407 782 Calmodulin-binding Proteins AT5G65930 40.849 3.52e-78 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0487 K10405 - vvi:100248639 1568.9