Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0485 ATGACAAGTTCTAAACAGCTTGAAGTTCAATCAGAAGATCGAACTCCACAGAAATGGTGCGTTTCATTGAGGGAAGACAAGTTTGAAGCATTTCTCTCCCAAGGCAACCCAACAGTGAGGAAGGTTTTTGGTGATGGGTCACTGTTCAGCCCCTTCTTGTTCAGAAAATTCTTTGATCCTTCTGATGCCTTCCCTCTATGGGAGTTTGAGTCTGATGTTTTGCTGTCTCATCTTCGGAGTTCCGGTCAGACCACGGTCGATTGGCTCCAGACAGATAAAGACTATGTACTAAAAGCAGAACTACCAGGAGTTGGGAAAAATAGTGTTCAAGTCTATGTGGAAAATGGGAAAGTTGTGGAGATTAGTGGACTATGGAGGCATCAAAAGGAGCCCAAGACAAAGGAATGGAGAAGTGGGCATTGGTGGGAACATGGATATGTCCGGAGGCTTGAGCTGCCGGAAAATGCAGATTGGAGGAGGATTGAGGCCAGTGTGAAGGATGAAATATATTTGGAGATTAGAATTCCCAAGTGTGATATTCCTCATGGAAAGGAAGAGGGAGCTGAAGATTCTGAATAA 579 0.4439 MTSSKQLEVQSEDRTPQKWCVSLREDKFEAFLSQGNPTVRKVFGDGSLFSPFLFRKFFDPSDAFPLWEFESDVLLSHLRSSGQTTVDWLQTDKDYVLKAELPGVGKNSVQVYVENGKVVEISGLWRHQKEPKTKEWRSGHWWEHGYVRRLELPENADWRRIEASVKDEIYLEIRIPKCDIPHGKEEGAEDSE* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0485 192 Gene3D - 45 186 IPR008978 -
Vvi19g0485 192 Pfam Hsp20/alpha crystallin family 87 179 IPR002068 -
Vvi19g0485 192 SUPERFAMILY HSP20-like chaperones 50 180 IPR008978 -
Vvi19g0485 192 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 77 192 IPR002068 -
Vvi19g0485 192 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 1 179 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0485 - - vvi:100243502 404.445