Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0478 ATGTATAGGCCAGCTGCCGTCACAAGGCGGAGAAATCCACTCGGTGCCTTTCTTCTTCCACCTTCTGCCTTCTTCATCAGATTCAACTTTCCCTTTTGGAGGTTGGTTTTTTTGGTAGCTGGGATTTTGCAGGAAAATAAAGGAATGGAAAATGGTCCAGAGAGGAAGGTGGAGGGGAAAAGAGAGGAGAAAATGAGGTTTTGTGTGACTGGTGCAACCGGGTATATTGGATCTTGGCTTGTCAACACTCTCCTTCAAAGAGGCTACATGGTTCATGCCACTCTCCGTGATCCTGAGAAGGCTGCACATCTTTTACCCTCATGGAGCAGCTGTGACCGATTGAGATTGTTCAAAGCTGATTTGCTGAATGAAGGGAGCTTTGATGAGGCCGTAAAGGGCTGCAATGGTGTATATCATGTTGCAGCTTCAATGGAATTCAACGTCATGGCCACAGAGAATATCGAGGCTTACGTTCAATCAAATATCATCGACCCTGCAATCAAAGGAACATTGAATCTTCTCAAAGCCTGCCTGAAATCAAAAACTGTAGAGAGGGTTGTGTTCACATCTTCTATCAGCACCATCACAGCCAAGGACAGCTTAGGAAGATGGAGAGCTGTAGTTGATGAATCATGCCAGACCCCCATTGATCACGTCTGGAAGACGAGAGTGGGTGGTTGGGTTTATGTGCTCTCAAAGCTTCTGACAGAGGAAGCTGCATTCCAGTTTGCAAAGGAGAATGGCATTGATCTTGTGTCGGTAATAACAACTACTGTTGGTGGTCCATTTATCACTTCCTCTGTTCCATCAAGCATTCGAGTTCTCTTGTCGCCAATAACAGGTGAACCCGAGTTTTTTTCCATATTATCTGCTGTGAATTCCAGAATGGGGTCATTGGCTTTAGTTCACATAGAGGATATATGCAATGCCCATATATTCTTGATGGAGCAGGCTAAAGCAGAAGGTCGATACATATGCGGTGTTCAAAGTTATCAAATGTCTGAATTGATCAATCATCTGGCTAAAGTGTACCCTTGCTCAAATATTCAAAGGTTGGTGGAGGAAGAATGTGGTTCAGCGCCTTCTGAAATTTGCTCTAAGAAGTTAAATGATTTGGGCTTCAACTACAAGTACGGCTTAGAAGACATTATCCAACAGACAATTAATTGTTGTTTAGATCATGGATTTCTACCTCAGATTAGAAGGTAA 1209 0.4351 MYRPAAVTRRRNPLGAFLLPPSAFFIRFNFPFWRLVFLVAGILQENKGMENGPERKVEGKREEKMRFCVTGATGYIGSWLVNTLLQRGYMVHATLRDPEKAAHLLPSWSSCDRLRLFKADLLNEGSFDEAVKGCNGVYHVAASMEFNVMATENIEAYVQSNIIDPAIKGTLNLLKACLKSKTVERVVFTSSISTITAKDSLGRWRAVVDESCQTPIDHVWKTRVGGWVYVLSKLLTEEAAFQFAKENGIDLVSVITTTVGGPFITSSVPSSIRVLLSPITGEPEFFSILSAVNSRMGSLALVHIEDICNAHIFLMEQAKAEGRYICGVQSYQMSELINHLAKVYPCSNIQRLVEEECGSAPSEICSKKLNDLGFNYKYGLEDIIQQTINCCLDHGFLPQIRR* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0478 402 CDD FR_SDR_e 68 374 - -
Vvi19g0478 402 Gene3D - 61 402 - -
Vvi19g0478 402 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 62 397 IPR036291 -
Vvi19g0478 402 FunFam Dihydroflavonol 4-reductase 58 399 - -
Vvi19g0478 402 Pfam NAD dependent epimerase/dehydratase family 68 323 IPR001509 -
Vvi19g0478 402 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 65 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0478 Vvi-Chr19 5318062 5326733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0478 56 396 Miscellaneous Gene Families AT4G27250 57.971 2.50e-141 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0478 - - vvi:100255535 811.986