Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0473 ATGGCCAAGGAAGGAAGATCGTATCGGCAAAAGAAGCGTGAGCCTAAGATTGTCAGGGGTTCAGCCATAGTTTGCAGGCTCATGGATGATATGGTTTCCCACAAGTTTGAGCAGAAGAGAGGACATGTTGCCTCAGCTGTTGAATGTTACATGAAGCAACATGGTGCGTCGGAGCAGGAAACGCACAACGAATTTAACAAACAAGTAAGAGATGCATGGAAGGATATTAATGAAGAGTGCCTCATCCCAACCGCTGTTCCAATGCCCATCCTCATGCGAGTTCTAAATCTTGCACGTGTGATAGATGTTTAA 312 0.4551 MAKEGRSYRQKKREPKIVRGSAIVCRLMDDMVSHKFEQKRGHVASAVECYMKQHGASEQETHNEFNKQVRDAWKDINEECLIPTAVPMPILMRVLNLARVIDV* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0473 103 PANTHER OS04G0344100 PROTEIN-RELATED 11 103 - -
Vvi19g0473 103 Gene3D Farnesyl Diphosphate Synthase 4 103 IPR008949 -
Vvi19g0473 103 SUPERFAMILY Terpenoid synthases 14 102 IPR008949 -
Vvi19g0473 103 Pfam Terpene synthase family 2, C-terminal metal binding 15 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0473 Vvi-Chr19 5243975 5244703 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0473 K15803 - vvi:100232954 167.933