Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0470 ATGGTTGATCGTTGTCGGACTACCACAGCGACAAAATATCCAGGATTTCAGTTTCATGGCTCTGATACCATCTTCAAATTGATAAATGATCATGCCCTAAAGCAGCCCATCCGAAAGGGGTTACCTAGGCTAGAGGCTAGGCATTATTTTTCAATATACCAAGCGGATGATTCTCATAATAAAGCTCTGCTGAAGCTAGCAAAGTTAGATTTCAACCTATTACAGAAATTACACCAGAAGGAGCTAAGTGATATTGCTGCGTGGTGGAAAAATTTAGACTTTGCACACAAGCTTCCTTTTGCAAGAGATCGAGTAGTGGAGTGCTACTTTTGGATATTGGGGGTGTACTTTGAGCCCCAGTTTTTCTTGGCTAGAAGGATACTGACTAAAGTAATAGCCATGACTTCCATTATTGATGACATCTATGACGTGTATGGTACACTCGAAGAACTCGAGCTCTTCACTGAAGCAGTTGAGAGGTGGGATATCAGTGCCATAGATCAACTACCAGAGTACATGAGAGTGTGCTATCGAGCACTCTTAGATGTATACAGTGAAATTGAGGAAGAAATTGCCAAGGAAGGAAGATCATATCGGTTCTACTATGCGAAAGAAGCAATGAAAAATCAAGTCAGAGCATATCATGAGGAAGCCAAATGGCTTCAAGTACAACAAATACCAACCATGGAGGAGTATATGCATGTGGCATTAGTTACCTCTGCATACTCAATGCTGGCGACCACATCTTTTGTCGGAATGGGAGATGCCGTGACAGAAGAAACTTTCGATTGGGTCTTCAGTCAACCTAAGATTGTCAGGGCTTCAGCAATAATTTGCAGGCTCATGGATGACATGGTTTCTCATAAGTTTGAACAAAAAAGAGGACATGTTGCCTCAGCTGTTGAATGTTACATGAAGCAACATGGTGCCTCGGAGCAGGAAACACACAAGGAATTTAATAAACAAGTAAGAGATGCATGGAAGGATATCAATGAAGAGTGCCTCATGCCAACAGCTGTTCCAATGACCGTTCTAAATCTTGCCCGTGTTATAGATGTTATATACAAGAACGAAGATGGCTATACTCATTCTGAGACCATTCTAAAAGATATTATAACCTCCATGCTAATAGATGCGGTGCCAATATGA 1149 0.4134 MVDRCRTTTATKYPGFQFHGSDTIFKLINDHALKQPIRKGLPRLEARHYFSIYQADDSHNKALLKLAKLDFNLLQKLHQKELSDIAAWWKNLDFAHKLPFARDRVVECYFWILGVYFEPQFFLARRILTKVIAMTSIIDDIYDVYGTLEELELFTEAVERWDISAIDQLPEYMRVCYRALLDVYSEIEEEIAKEGRSYRFYYAKEAMKNQVRAYHEEAKWLQVQQIPTMEEYMHVALVTSAYSMLATTSFVGMGDAVTEETFDWVFSQPKIVRASAIICRLMDDMVSHKFEQKRGHVASAVECYMKQHGASEQETHKEFNKQVRDAWKDINEECLMPTAVPMTVLNLARVIDVIYKNEDGYTHSETILKDIITSMLIDAVPI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0470 382 FunFam Isoprene synthase, chloroplastic 46 370 - -
Vvi19g0470 382 Pfam Terpene synthase family, metal binding domain 64 329 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vvi19g0470 382 PANTHER OS04G0344100 PROTEIN-RELATED 30 363 - -
Vvi19g0470 382 SUPERFAMILY Terpenoid synthases 59 379 IPR008949 -
Vvi19g0470 382 CDD Terpene_cyclase_plant_C1 24 378 IPR044814 GO:0010333|GO:0016102
Vvi19g0470 382 Gene3D Farnesyl Diphosphate Synthase 22 380 IPR008949 -
Vvi19g0470 382 SFLD Terpene Cyclase Like 1 C Terminal Domain 59 380 IPR034741 -
Vvi19g0470 382 SFLD Isoprenoid Synthase Type I 59 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0470 Vvi-Chr19 5215110 5216944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0470 K15803 - vvi:100252140 711.064