Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0467 ATGGAGGAGTATATGTCTGTGGCATTAGTTACCTCTGCATACTCCATGCTGGCGACCACATCGTTTGTTGGAATGGGAGATGCAGTGACAGAAGAAACTTTCGATTGGGTCTTCAGTCAACCTAAGATTGTCAGGGCTTCAGCAATAATTTGCAGGCTCATGGATGATATGGTTTCCCCTAAGTTTGAACAAAACAGAGAACATGTTGCCTCAGCTGTTGAATGTCACGTGAAGCAACATGGTGCCTCGGAGCAGGAAACACACAAGGAATTTAATAAACAAGTAACAAATGCATGGAAGGATGTCAATGAAGAGTACCTCATCCCAACAGCTGTTCCAATGACCATCCTCACGCGGGTTCTAAATCTTTCACGGGTTATAGATGTTATATACAAGAACGAAGATGGCTATACTCATTCTAGGACTGTTCTAAAAGATTTCGTAACTTCCATGCTAATCGATTCTGTGCCAATATTGTAG 480 0.4229 MEEYMSVALVTSAYSMLATTSFVGMGDAVTEETFDWVFSQPKIVRASAIICRLMDDMVSPKFEQNREHVASAVECHVKQHGASEQETHKEFNKQVTNAWKDVNEEYLIPTAVPMTILTRVLNLSRVIDVIYKNEDGYTHSRTVLKDFVTSMLIDSVPIL* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0467 159 PANTHER OS04G0344100 PROTEIN-RELATED 1 144 - -
Vvi19g0467 159 Gene3D Farnesyl Diphosphate Synthase 1 156 IPR008949 -
Vvi19g0467 159 Pfam Terpene synthase family, metal binding domain 1 101 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vvi19g0467 159 SUPERFAMILY Terpenoid synthases 1 155 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0467 Vvi-Chr19 5188869 5189447 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0467 K15803 - vvi:100252140 273.092