Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0466 ATGACTTCTGTCATTGATGACATCTATGACGTGTATGGTACACTCGAAGAACTCAAGCTCTTCACTGAAGCAGTTGAGAGGTGGGATATCAGTGCCATAGATCAACTACCAGAGTACATGAGAGTGTGTTATCGAGCGCTCTTAGATGTATACAGTGAAATTGAGGAAGAAATGGCCAAGGAAGGAAGATCATATCGGCTCTACTATGCGAAAGAAGCAATGAAAAATCAGAGCATATCATGA 243 0.4156 MTSVIDDIYDVYGTLEELKLFTEAVERWDISAIDQLPEYMRVCYRALLDVYSEIEEEMAKEGRSYRLYYAKEAMKNQSIS* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0466 80 PANTHER OS04G0344100 PROTEIN-RELATED 1 76 - -
Vvi19g0466 80 SUPERFAMILY Terpenoid synthases 2 77 IPR008949 -
Vvi19g0466 80 Pfam Terpene synthase family, metal binding domain 1 77 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vvi19g0466 80 Gene3D Farnesyl Diphosphate Synthase 1 77 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0466 Vvi-Chr19 5188377 5188831 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0466 K15803 K23172 vvi:100252140 152.14