Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0461 ATGTCCCAAGCGACCTCGTTCCATGAGGACCAGGACCTCGCGTCGCCGTTGCTCCGGGCGGTGAAGACCCGCGGCGGAGAGCCCCAGAAGCTGTGCATCGACGACATGCTCCAGCGGCACTGCGGCGAGTTTGGGGTGTGGCAACTGAGACACTTCGTTCTCACCAGCCTCGCTTGGGCTCTCGAGGCCTTCCACACCATGGTCATGATCTTTGCCGATCAGGAACCGGCTTGGACGTGCGTGAGCAGCCGCGGCTGCTCCGTCGCGTCAACCAGCGTTTGTGGGTTGGACCCAGGTTCGTGGGAATGGAGCGGCGGTCCGGGGAGCTCTACAGCGGCGGAGTGGGGACTGGTTTGTGAGAACAAATACAAGGTCGGGCTGGTTCAGGCCTTGTTCTTCGGCGGCTGCATGATTGGTGCAGGAGTTTTTGGTCATCTCTCAGACTCCTTCCTAGGAAGGAAAGGATCTCTAACTGTAGTCTGCATCTTGAATGCCGTCTTCGGCTGCTTGACCGCCTTATCTCCCGGCTTCTGGGCCTACGCCCTCCTCCGTCTTCTCACCGGCTTCAGCACTGGCGGTGTTGGCCTTTGTGCCTTCGTCCTCGCCACCGAGCCCGTCGGCCCTACCAAGCGTGGCGTAGCTGGAATGTCCACGTTCTACTTCTTCTCAACCGGCATTGCACTGCTTTCTGGCATAGCTTATATTTTCCCGTCATGGCGCTCTCTCTACATCGCCTCCTCCCTTCCCTCCGTTCTCTTCGTTATACTTGTCATTCCTTTTCTCTCCGAGTCCCCCAGATGGTACCTCGTACGTGGGAAAATCAATGAGGCCATGGAAGTCATGCGCGTCATTGCCAAGTCCAATGGAAAGCACTTGCCTGATGGGGTCGTCCTTGGCCTGGACGAAGAAACCAACGAGAATTCAACTGATACTGAGAGCTATAAGGAGGAATTGTCCACCAAACAAGCAATATCAGGATCTCTCATAGATGTAATTAGGTCACCTATCACAAGGTTTCGATTATTTCTAGCAGTGGTCATTAACTTCTTGTGCTCAGTAGTGTACTATGGCCTTAGTCTAAACGTCGTCAACCTTGAAACCAACCTCTATCTCAGTGTGCTGCTCAATGCCGTGGCTGAAATGCCAGCATACACCTTGACAGCAGTTTTGTTAGACAGGTTCGGGAGGAAGCCATTGGCGATTGGGACACTGTGGTTCAGTGGATTTTTCTGCCTTTTGGGGACACTGGTGAAAAGCAATGGGATATGGAAGGTTGTCCGAATGGTATGTGGAGTTTTGGGAATATTTGGGATGGCCGGAACTTATAACTTGTTGTTCATTTACACGACGGAGCTGTTTCCGACTGTGGTTAGGAATGCGGCACTCGGGTGTGCGACCCAGGCGGCGCAGATGGGGGCGATATTGGCACCCTTTGTGGTGGTTTTAGGCAAGGTATTGCCATTTGCAGTGTTTGGAGCTTGTGGGATTTCCGGCGGCATACTCGCTTTCTACTTGCCGGAGACTTTGAACCAGCCATTGTACGACACCATGACCGGAATGGAGGATGCTGAGAAGGCATTGAAGGAGTAA 1590 0.5371 MSQATSFHEDQDLASPLLRAVKTRGGEPQKLCIDDMLQRHCGEFGVWQLRHFVLTSLAWALEAFHTMVMIFADQEPAWTCVSSRGCSVASTSVCGLDPGSWEWSGGPGSSTAAEWGLVCENKYKVGLVQALFFGGCMIGAGVFGHLSDSFLGRKGSLTVVCILNAVFGCLTALSPGFWAYALLRLLTGFSTGGVGLCAFVLATEPVGPTKRGVAGMSTFYFFSTGIALLSGIAYIFPSWRSLYIASSLPSVLFVILVIPFLSESPRWYLVRGKINEAMEVMRVIAKSNGKHLPDGVVLGLDEETNENSTDTESYKEELSTKQAISGSLIDVIRSPITRFRLFLAVVINFLCSVVYYGLSLNVVNLETNLYLSVLLNAVAEMPAYTLTAVLLDRFGRKPLAIGTLWFSGFFCLLGTLVKSNGIWKVVRMVCGVLGIFGMAGTYNLLFIYTTELFPTVVRNAALGCATQAAQMGAILAPFVVVLGKVLPFAVFGACGISGGILAFYLPETLNQPLYDTMTGMEDAEKALKE* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0461 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 51 510 IPR020846 GO:0022857
Vvi19g0461 529 Gene3D MFS general substrate transporter like domains 90 522 IPR036259 -
Vvi19g0461 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 44 516 - -
Vvi19g0461 529 SUPERFAMILY MFS general substrate transporter 121 513 IPR036259 -
Vvi19g0461 529 ProSitePatterns Sugar transport proteins signature 1. 387 403 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vvi19g0461 529 ProSitePatterns Sugar transport proteins signature 2. 186 211 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vvi19g0461 529 Pfam Sugar (and other) transporter 122 514 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi19g0461 529 Coils Coil 520 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0461 Vvi-Chr19 5086044 5088911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0461 11 524 Organic Solute Cotransporters AT3G20660 69.961 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0461 K08202 - vvi:100265876 1048.5