Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0454 ATGGCGTTCTCTGTTCTGGGGTTCCTCTCTCTCCTCTTCTCCCTTTCCTCAGCCGTCGACACCATCCACGACCTCCTCCGCTCCCGTGGCCTCCCAGCGGGGCTCCTGCCAAAGGCCGTCCGGTCCTACACCCTCGATCCCGATGGCCGCCTCCAGGTCTTCCTGGACGGCCCTTGCCTCACCAAGTTCGAGACCAGAGTTTACTTCGACAGCGTCGTCACCGCCAATCTCAGCTACGGCGGCCTCATTGGAGTCGTCGGTCTCACCCAGGAGGAGCTCTTTCTCTGGCTTCCCGTTAAGGACATCATCGTTGATGATCCCAACTCTGGCTTGATTTTGTTCGACATCGGCCTCGCTCACAAGCAGCTTTCGCTCTCGCTCTTTGAGGATCCACCTGACTGCAAACCTCAAGGTTCTTTACAGAAGAACGTGAGGAAGGAGAAAGGATTCGAGTTTGTTAGATAG 465 0.5677 MAFSVLGFLSLLFSLSSAVDTIHDLLRSRGLPAGLLPKAVRSYTLDPDGRLQVFLDGPCLTKFETRVYFDSVVTANLSYGGLIGVVGLTQEELFLWLPVKDIIVDDPNSGLILFDIGLAHKQLSLSLFEDPPDCKPQGSLQKNVRKEKGFEFVR* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0454 154 Pfam Protein of unknown function, DUF538 23 129 IPR007493 -
Vvi19g0454 154 Gene3D - 13 136 IPR036758 -
Vvi19g0454 154 SUPERFAMILY At5g01610-like 11 137 IPR036758 -
Vvi19g0454 154 FunFam Uncharacterized protein At3g07460 10 139 - -
Vvi19g0454 154 PANTHER T31J12.3 PROTEIN-RELATED 16 135 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0454 Vvi-Chr19 5040576 5041504 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0454 - - vvi:100260725 292.737