Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0451 ATGGCTGATTTCCCCTATATATACCCACTTCTCTCACCATTTTCAAGCACCCAAAAACCATCTTCTTCTACTCATCATCCCTCCTCTCTCTCTCTCTCTCTCTCTCTGCAACCAACCATGCCTGAAGCTCCAAAGAAGTCATTCAAAGCAACGGGGCACGACTACTGTCTGGCAGAGAAGAACAAGAAGGCTCTTCAGTTCATTGAAGATGTCACCACCAACGCTGATCAAGTCCAGAAGAGGGTGTTGGCTGAAATTCTCACCCGCAATGCCCACGTTGAGTACTTGCACCGCCACGGCCTCGGCGGCCACACTGACCGTGACACCTTCAAGAAACTCATGCCTGTCATCACCTACGAGGATTTGCAGCCTGATATCACCCGTATCGCCAATGGGGATACCTCTCTGATTCTGTGCTCCAACCCCATCTCCGAGTTCCTCACAAGCTCGGGGACTTCTGGCGGGGAGAGGAAGCTGATGCCAACCATAGAAGAAGAGCTGGAGAGGAGGTCATTGCTTTATAGTCTGCTCATGCCGGTGATGAGCCAGTCCGTTCAGGGACTCGAAAAGGGAAAAGGGATGTATTTTTTGTTCATTAAGTCTGAGGCCAAAACCCCAGGTGGGCTTGTGGCACGCCCGGTGCTCACAAGCTACTACAAAAGCTCCCATTTCAGGGAGAGGCCTTATGACCCTTACACCAACTACACTAGCCCAAACGAAACCATTCTCTGTCCAGACTCTTACCAGAGCATGTACTCCCAAATGCTCTGTGGCCTTGTCCAGAACAAGGAGGTCCTCCGGGTGGGCGCCGTGTTCGCCTCCGGCTTCATTCGGGCAATTCGCTTCCTGGAGAAGCACTGGACTCTTCTTTGCAGGGACATAAGGACTGGAACCATCGACCAACAAATCACCGACCCCTCCGTGAGGGAGGCGGTCATGAGGGTGCTTAAACCCGATCCCAAGCTTGCGGATTTCGTGGAGGGTGAATGTAGGAAGGAGTCATGGCAAGGGATCATCACAAGGCTGTGGCCTAATACCAAGTATGTGGATGTAATTGTGACTGGGACCATGTCACAGTACATTCCAACTCTTGATTACTATAGCAATGACCTCCCTTTAGTGTGCACCATGTATGCTTCTTCCGAGTGTTATTTTGGTGTCAACCTCAACCCTCTCTGCAAGCCAAGCGAAGTCTCCTACACCCTCATTCCCACTATGGCCTATTTCGAGTTCTTGCCCGTTCACAGAAACAATGGGACCAATTCCATCTCTGTCCCCAAATCCCTCAATGACAAGGAGCAACAAGACTTGGTCGATCTCGTCGATGTCAAGCTTGGGCAGGAGTATGAGCTGGTCGTCACCACTTATGCCGGGCTGTATAGGTATAGAGTAGGAGATGTGCTCCGTGTGGCCGGATTCAAGAACAAGGCACCCCAGTTCAACTTCGTATGCCGGAAGAATGTGGTGTTGAGCATCGATTCCGATAAGACGGATGAGGTTGAGCTGCAGGCGGCGGTGAAGAATGCGGTGAACCACCTGATGCCGTTCGACGCGACTCTCACCGAGTACACAAGCTATGCGGATACCACCACAATTCCAGGCCACTATGTCCTGTACTGGGAGCTGAGCCTGAGGGGGTCAACCCCAATTCCTCCATCTGTTTTCGAGGACTGCTGCCTGACTGTCGAAGAATCCCTCAACAGCGTGTACCGGCAAGGCAGGGTCTCAGACAAGTCGATTGGGCCACTGGAGATGAAGATTGTGGAGTCAGGGACATTCGACAAGCTGATGGACTATGCCATTAGCCTAGGGGCGTCCATAAACCAGTACAAGACCCCACGGTGTGTGAAATTTGCGCCCATCATTGAGCTATTGAACTCAAGGGTTGTGTCCAACTACTTCAGCCCCAAGTGCCCCAAATGGATTCCTGGACACAAGCAATGGTGCAACAAGAACTGA 1959 0.5171 MADFPYIYPLLSPFSSTQKPSSSTHHPSSLSLSLSLQPTMPEAPKKSFKATGHDYCLAEKNKKALQFIEDVTTNADQVQKRVLAEILTRNAHVEYLHRHGLGGHTDRDTFKKLMPVITYEDLQPDITRIANGDTSLILCSNPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMSQSVQGLEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSSHFRERPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLVQNKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRTGTIDQQITDPSVREAVMRVLKPDPKLADFVEGECRKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNDLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGTNSISVPKSLNDKEQQDLVDLVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQAAVKNAVNHLMPFDATLTEYTSYADTTTIPGHYVLYWELSLRGSTPIPPSVFEDCCLTVEESLNSVYRQGRVSDKSIGPLEMKIVESGTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNSRVVSNYFSPKCPKWIPGHKQWCNKN* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0451 652 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 61 638 IPR004993 -
Vvi19g0451 652 MobiDBLite consensus disorder prediction 15 35 - -
Vvi19g0451 652 Pfam GH3 auxin-responsive promoter 68 617 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0451 Vvi-Chr19 5016030 5018177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0451 57 635 EF-hand Containing Proteins AT1G23160 50.340 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0451 K14487 - vvi:100250242 1278.85