Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0448 ATGGTGACCAAAGTGTATATTGTGTACTACTCTATGTATGGACATGTAGAGAAGCTCGCAGAAGAGATAAAGAAAGGAGCTGCATCTGTTGAAGGAGTTGAAGCCAAACTATGGCAGGTTCCTGAGACACTACCAGAGGAGGTCCTTGGCAAGATGAGTGCACCACCAAAAAGTGATACACCAATAATTACACCGACTGACCTTGCTGAGGCTGATGGATTTGTTTTCGGCTTCCCTACAAGATTTGGAATGATGGCTGCTCAATTCAAAGCGTTTCTTGATGCTACTGGTGGCCTATGGAGAACACAACAGCTTGCAGGTAAACCAGCTGGGATCTTCTATAGCACCGGATCTCAAGGTGGTGGACAAGAGACTACTGCGTTGACTGCAATTACTCAGCTGGTTCATCATGGGATGATCTTTGTTCCCATTGGATACACTTTTGGAGCTGGGATGTTTGAGATGGAGAAGGTGAAAGGCGGGAGTCCCTACGGTGCAGGAACTTTCGCTGGGGACGGCTCAAGACAACCATCTGAGCTCGAATTGGAGCAAGCTTTCCACCAGGGGAAGTACATTGCTGGCATCACAAAGAAACTCAAGGAAGCAGCTTAA 612 0.4722 MVTKVYIVYYSMYGHVEKLAEEIKKGAASVEGVEAKLWQVPETLPEEVLGKMSAPPKSDTPIITPTDLAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGIFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAGDGSRQPSELELEQAFHQGKYIAGITKKLKEAA* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0448 203 SUPERFAMILY Flavoproteins 3 200 IPR029039 -
Vvi19g0448 203 ProSiteProfiles Flavodoxin-like domain profile. 5 192 IPR008254 GO:0010181
Vvi19g0448 203 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 1 201 - -
Vvi19g0448 203 Gene3D - 1 201 IPR029039 -
Vvi19g0448 203 NCBIfam NAD(P)H:quinone oxidoreductase, type IV 3 199 IPR010089 GO:0003955|GO:0010181
Vvi19g0448 203 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 4 200 - -
Vvi19g0448 203 Pfam NADPH-dependent FMN reductase 17 144 IPR005025 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0448 Vvi-Chr19 4962716 4967446 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0448 K03809 - vvi:100232919 404.445