Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0432 ATGGATTCTCTTACAACAGTTGCAGTTATCTTCTCCTATGTATTATCCCTCTTAAGAATCTCCGTGGCAGTAGACACCATAATTGTAAATCAAAACATTACAGATGGTGAGACCATCACTTCAGCTGGTGGGAGCTTTGAACTGGGTTTCTTCAGTCCAGGTAATTCCAAGAACCGATACTTGGGGATATGGTACAAGAAAGCGTCTAAAAAGCCTGTCGTATGGGTTGCCAATAGAGAAAGTCCAATAACTGATTCATCAGGAGTTTTAAAGGTCACTCAGCCGGGAATTCTTGTTCTCGTCAACGGTACTAACGGAATTCTTTGGAATTCTACTTCATCACGTTCTGCACAGGATCCGAACGCTCAGCTTTTGGAGTCTGGAAATCTTGTTATGAGAAATGGCAATGATAGGGATCCAGAAAACTTCCTATGGCAGAGTTTTGATTACCCATGCGATACTCTTCTACCAGGCATGAAGCTTGGAAGGAACAGAGTAGCAGGCCTGGATCGGTACCTGTCATCGTGGAAGAGTGCTGATGACCCTTCTAAAGGTAATTTTACTTATTGGATTGATCCTAGTGGATTTCCACAACTACTTTTGAGGAATGGTTTAGCTGTAGCATTTCGCCCTGGACCATGGAATGGTATTCGATTCAGTGGAATTCCTCAATTAACAATTAACCCAGTTTATAGTTATGAATATGTTTCTAATGAAAAGGAGATATATTATATTTATTCTCTTGTTAACAGCTCTGTTATTATGAGGCTTGTGTTAACTCCTGATGGTGCAGCTCAGCGGTCCATATGGACTGATAAAAAAAATGAATGGACTCTTTACTCAACTGCACAGAGGGATCAGTGTGACAATTATGCAATATGTGGAGTAAATGGAATCTGTAAGATTGACCAATCTCCGAACTGTGAGTGTATGAAAGGATTTAGGCCAAAGTTCCAAAGCAATTGGGACATGGAAGACTGGTCAAATGGATGCGTTCGAAGTACTCCACTGGATTGCCAGAAGGGTGATGGATTTGTAAAGTACTCTGGTGTGAAACTGCCAGACACACGGAGCTCCTGGTTTAATGAAAGCATGAACCTTAAGGAATGTGCTTCCCTGTGCTTGAGCAACTGCTCTTGCACTGCTTATGCAAATTCAGATATCAGAGGAGGAGGAAGTGGATGCTTGCTCTGGTTTGGTGACTTGATTGACATCAGAGACTTCACTGAAAATGGGCAAGAGTTTTATGTAAGGATGGCTGCGGCAGACTTAGCTTCTTCAAGCATAAATAGCAGCTCCAAGAAGAAGAAAAAACAGGTCATTATCATCTCTATATCAATTACAGGAATAGTTCTTTTAAGTCTAGTCCTGACCTTGTATGTGCTCAAGAAAAGGAAGAAACAACCAAAGAGAAAAGCATACATGGAACACAATTCAAAAGGAGGTGAAAACAATGAAGGCCAAGAGCATCTAGAGTTACCATTATTTGACTTGGATACATTATTAAATGCCACTAATAACTTTTCTAGTGACAATAAGCTTGGAGAGGGTGGTTTTGGACCTGTCTATAAGGTATGGTCATACTTTGCCCTTTGGGCAAGAAGACAAGTTACAAGTTAA 1620 0.408 MDSLTTVAVIFSYVLSLLRISVAVDTIIVNQNITDGETITSAGGSFELGFFSPGNSKNRYLGIWYKKASKKPVVWVANRESPITDSSGVLKVTQPGILVLVNGTNGILWNSTSSRSAQDPNAQLLESGNLVMRNGNDRDPENFLWQSFDYPCDTLLPGMKLGRNRVAGLDRYLSSWKSADDPSKGNFTYWIDPSGFPQLLLRNGLAVAFRPGPWNGIRFSGIPQLTINPVYSYEYVSNEKEIYYIYSLVNSSVIMRLVLTPDGAAQRSIWTDKKNEWTLYSTAQRDQCDNYAICGVNGICKIDQSPNCECMKGFRPKFQSNWDMEDWSNGCVRSTPLDCQKGDGFVKYSGVKLPDTRSSWFNESMNLKECASLCLSNCSCTAYANSDIRGGGSGCLLWFGDLIDIRDFTENGQEFYVRMAAADLASSSINSSSKKKKKQVIIISISITGIVLLSLVLTLYVLKKRKKQPKRKAYMEHNSKGGENNEGQEHLELPLFDLDTLLNATNNFSSDNKLGEGGFGPVYKVWSYFALWARRQVTS* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0432 539 Pfam D-mannose binding lectin 73 177 IPR001480 -
Vvi19g0432 539 SMART ntp_6 340 419 IPR003609 -
Vvi19g0432 539 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 524 - -
Vvi19g0432 539 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Vvi19g0432 539 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 148 - -
Vvi19g0432 539 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Vvi19g0432 539 SMART blect_4 30 151 IPR001480 -
Vvi19g0432 539 SUPERFAMILY Protein kinase-like (PK-like) 489 528 IPR011009 -
Vvi19g0432 539 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Vvi19g0432 539 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Vvi19g0432 539 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 419 - -
Vvi19g0432 539 Pfam PAN-like domain 339 405 IPR003609 -
Vvi19g0432 539 Gene3D Hepatocyte Growth Factor 336 419 - -
Vvi19g0432 539 CDD B_lectin 33 151 IPR001480 -
Vvi19g0432 539 Gene3D Phosphorylase Kinase; domain 1 469 534 - -
Vvi19g0432 539 CDD PAN_AP_plant 335 420 - -
Vvi19g0432 539 Gene3D - 19 148 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0432 Vvi-Chr19 4747151 4749486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0432 429 524 Receptor kinase-like Gene Family AT5G10530 39.175 1.75e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0432 - - vvi:109121536 971.844