Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0414 ATGGATGCTCTTGCAAGACTAGTGATCATCTTCTCTTCTGTACTCTTCATCGTACCAATTTCCATTGCTGTAGATACAATAACAGTAAATCAACCCATCAGATATGGTGAAACCATAATTTCAGCTGGTGGGAGCTTTGAACTGGGTTTTTATACTCCAGAGAATTCGAAGAATCAATACTTGGGGATATGGTACAAGAAGGTGACTCCTCGGACAGTGGTATGGGTTGCCAACGGAGACTTCCCACTCACTGATTCATTGGGAGTTTTGAAGGTCACAGACCAGGGAACTCTTGTTATTCTCAATGGCACTAATAGCATCATTTGGTCTTCTAATGCATCACGATCTGCACAGAATCCAACTGCCCAGCTTTTGGAGTCTGGAAATCTTGTATTGAAAAATGGAAATGATGATGACCCAGAAAATTTCTTATGGCAGAGCTTTGATCATCCATGCAGTACTCTTCTACCAAACATGAAGCTTGGAAGGAACAAGTCAACAGGCCAGGAATGGTACCTATCATCAAGTAAGAGTACCGATGATCCATCCAAGGGTAATCTTACTTATCGGCTTGATCCCCATGGCTATCCTCAACTTCTCAAGAGGAATGGGCTGATTCTGACGTTTTGCTCTGGACCATGGAATGGTCTCCGTTTTAGCGGGTTTCGAGCATTAGCAGGGAAATCAATTTATAAACATGTTTTTACTTTTAATGAAAAGGAGATGTATTATACATATGAACTTCTTGACAGCTCTGTTGTTTCAAGGTTGGTGCTAAATTCAAATGGTGATGTGCAACGCCTCACATGGACAGATGTTACTGGTTGGACTGAATACTCGACCATGCCGATGGATGACTGCGATGGTTATGCATTCTGTGGCGTGCATGGCTTCTGTAATATAAACCAAGTTCCAAAATGTGGTTGCTTGGACGGTTTTCAGCCAAATTTCCCAAACAACTGGGAGATGGGGGTTTGGTCAAATGGATGTTTTCGCAGTAGGCCGTTGGATTGTCAGAGAGGAGAATGGTTTAAAAAGTACTCTGGTGTGAAGCTGCCAGATACTCGGAATTCAACGTATATTGAAGCATAA 1092 0.4231 MDALARLVIIFSSVLFIVPISIAVDTITVNQPIRYGETIISAGGSFELGFYTPENSKNQYLGIWYKKVTPRTVVWVANGDFPLTDSLGVLKVTDQGTLVILNGTNSIIWSSNASRSAQNPTAQLLESGNLVLKNGNDDDPENFLWQSFDHPCSTLLPNMKLGRNKSTGQEWYLSSSKSTDDPSKGNLTYRLDPHGYPQLLKRNGLILTFCSGPWNGLRFSGFRALAGKSIYKHVFTFNEKEMYYTYELLDSSVVSRLVLNSNGDVQRLTWTDVTGWTEYSTMPMDDCDGYAFCGVHGFCNINQVPKCGCLDGFQPNFPNNWEMGVWSNGCFRSRPLDCQRGEWFKKYSGVKLPDTRNSTYIEA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0414 363 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 148 - -
Vvi19g0414 363 Gene3D - 20 148 IPR036426 -
Vvi19g0414 363 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Vvi19g0414 363 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 216 IPR036426 -
Vvi19g0414 363 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 361 - -
Vvi19g0414 363 CDD B_lectin 30 151 IPR001480 -
Vvi19g0414 363 Pfam D-mannose binding lectin 72 177 IPR001480 -
Vvi19g0414 363 SMART blect_4 30 151 IPR001480 -
Vvi19g0414 363 Pfam S-locus glycoprotein domain 210 316 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0414 Vvi-Chr19 4554122 4555213 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0414 - - vri:117909137 503.056