Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0408 ATGGGTCCACGAGCCGATATGTGGGAACATGGTACAGGAATTGTCCGGATCATGTGGAGTTTTAAGTTTTTAACCATTCCCAACAATGGAAGTCTAGTCCTCCTTGATCAAAAACAGAGGATTATCTGGTCATCGGGTTCTACAAGAGCCACTGAAAATCCAGTTGTGCAGCTGTTGGAATCCGGAAACCTTGTTCTTAGAGAAAAGAGTGATGTAAATCCAGAAATCTGTATGTGGCAAAGTTTTGATGCCCCCTACAATCCACAAATGCCAGACATGAAGCTGGGATGGAACTTTAGCACTGGCATGGAGCAATATTTGACATCCTGGAGAACTGCCAGTGACCCTTCCCCTGGAGACTTTAATCTCAAATTTGAAATTGTTGGGCTGCCTCAGGTTGTTCTTCAAAAAGGATCAGAGAAGAAGTTCCGTAGTGGACCATGGAATGGACTTCGCTTTGGTGGTTCAGACTCAGAAAAGGAAGACCTGGAGTTACCACTGTGTGATCTGGCTACTGTTACAAATGCTACTAATAACTTTTCTTACACAAATATGATTGGAAAGGGTGGATTTGGCCCTGTTTACAAGGATACACTGCCAGTGGGACAAGAAGTAGCAGTTAAGAGGCTTTCAAATAATACTGGACAAGGGCTTCAAGAGTTCAAGAATGAAGTCATTCTGATTTCCAAACTCCAACACTGA 702 0.4316 MGPRADMWEHGTGIVRIMWSFKFLTIPNNGSLVLLDQKQRIIWSSGSTRATENPVVQLLESGNLVLREKSDVNPEICMWQSFDAPYNPQMPDMKLGWNFSTGMEQYLTSWRTASDPSPGDFNLKFEIVGLPQVVLQKGSEKKFRSGPWNGLRFGGSDSEKEDLELPLCDLATVTNATNNFSYTNMIGKGGFGPVYKDTLPVGQEVAVKRLSNNTGQGLQEFKNEVILISKLQH* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0408 233 SUPERFAMILY alpha-D-mannose-specific plant lectins 19 116 IPR036426 -
Vvi19g0408 233 FunFam Uncharacterized protein 4 83 - -
Vvi19g0408 233 ProSiteProfiles Protein kinase domain profile. 180 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi19g0408 233 Gene3D Phosphorylase Kinase; domain 1 155 233 - -
Vvi19g0408 233 ProSiteProfiles Bulb-type lectin domain profile. 1 79 IPR001480 -
Vvi19g0408 233 Gene3D - 5 83 IPR036426 -
Vvi19g0408 233 SUPERFAMILY Protein kinase-like (PK-like) 167 233 IPR011009 -
Vvi19g0408 233 Pfam D-mannose binding lectin 22 111 IPR001480 -
Vvi19g0408 233 FunFam Uncharacterized protein 155 233 - -
Vvi19g0408 233 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 159 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0408 Vvi-Chr19 4503251 4505264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0408 141 233 Receptor kinase-like Gene Family AT4G23230 50.538 9.28e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0408 - - vvi:100265866 180.259