Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0402 ATGTTTGATTGGTCTAGTGGATGTGAAAGGGCAGGGACCTTGGATTGCAAGAGCAAAGATGACCTTATGAAGGTCTTAGGGGTGAAATTGCCTGACTTGTTGGAGTTTTGGTTGAACAAGAGTATGAGCCTCAAGGAATGTGAGGCAGAGTGCTTGAAGAACTGCTCCTGTGTGGCGTATGCAAATTCAAACATTAAAGGTGGAAGCAGTGGTTGTTTGACCTGGTATGGAGATCTGATTGATATTGGAGGGTTCACAGATGGGAAAAGTGGGCAAGACCTTTATATCAGATGTCCAGCTGGGGAACTAGGCCTGGAAAGTGAGATGGAAGATTTGGAGTTACCTTTGTTTGATTTGGCTACCATTGATACTGCTACTAACAACTTCTGTGTCATAAATAGAATTGGCACAGGCAGCTTTGGTCCTGTTTTCAAGATCAAAACAGAAGAGCGTTACTGCCATGGAAAAAGCGCTTTGACATTGTTATGGGGATCTTGCAAGGACTTGTTCATCTCCACCAAGATTCTAGACTTCAAATCATTCACAGGGATCTCAAGGCAAGCAATATACTGCTAG 576 0.434 MFDWSSGCERAGTLDCKSKDDLMKVLGVKLPDLLEFWLNKSMSLKECEAECLKNCSCVAYANSNIKGGSSGCLTWYGDLIDIGGFTDGKSGQDLYIRCPAGELGLESEMEDLELPLFDLATIDTATNNFCVINRIGTGSFGPVFKIKTEERYCHGKSALTLLWGSCKDLFISTKILDFKSFTGISRQAIYC* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0402 191 Gene3D Phosphorylase Kinase; domain 1 102 157 - -
Vvi19g0402 191 SMART ntp_6 17 98 IPR003609 -
Vvi19g0402 191 CDD PAN_AP_plant 13 97 - -
Vvi19g0402 191 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 3 149 - -
Vvi19g0402 191 Pfam PAN-like domain 16 82 IPR003609 -
Vvi19g0402 191 ProSiteProfiles PAN/Apple domain profile. 16 100 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0402 Vvi-Chr19 4457082 4458630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0402 105 147 Receptor kinase-like Gene Family AT1G53420 51.111 6.25e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0402 - - vvi:109121860 280.026