Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0392 ATGGATCAAGGCCTCTTTTCAACTGAATCAGATGTCTTTAGCTTCAGGGTCTTGTTACGGGAGATTCTAAGAGGCAAAAAGAATACCAGATTTTACCAGAGTGACTCACTCAATCTTCTTGGATATGCATGGGATCTGTGGAAAAACAACATAGGGCTGGACTTGATGGATCCAGTATTGAGTTGGGAGGCACGGGTTCACATCATTCAAGGGGTGGCTCAGGGGACTTCTTTATCTCCATTAGTACTCTAG 252 0.4405 MDQGLFSTESDVFSFRVLLREILRGKKNTRFYQSDSLNLLGYAWDLWKNNIGLDLMDPVLSWEARVHIIQGVAQGTSLSPLVL* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0392 83 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 60 - -
Vvi19g0392 83 Gene3D Transferase(Phosphotransferase) domain 1 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0392 Vvi-Chr19 4317079 4320094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0392 3 60 Receptor kinase-like Gene Family AT4G23230 50.847 1.44e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0392 - - vri:117909109 99.3673