Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0383 ATGTTGGAAGAGGAAAACAGTGTTATTCTCCATGAAATTGTTGCCCTCAGTAACCTGTCTTTGGTTTTGAACAACTTCTGGTCTGAGAAGGTAGGAGAACTAAATGCACTTGCTGAAGATTTTGGCAATCTCCATGGGGTTAACAGTGACCTTGGGGAGGAGGTGGGAATTTTGACAGAGAAATTGGGACTGCAAGAAACTGAAAATTTACATCTGAAAGGGCTTGTTGAGAAGTTGGACAAGGAGCTGCATGAAGTTACAAATTTAAGTGATCAGTTGAACAATCAACTTTCAGTTGGAAAAGATTTGCTAAGCCAGAAGGAAAAGGATCTTTCAGAAGCAAAACAAAAGCTCAAAACTGCACAAGACTTGACTGCAGAATTATTTGGCACTGTTGAGGAATTGAAGAGGGAATGTGAAAAATCAGAAGTTCTAAGAGAAAATTCAGAGAAGCAGATTCTTGAACTATCTGAATAA 477 0.3878 MLEEENSVILHEIVALSNLSLVLNNFWSEKVGELNALAEDFGNLHGVNSDLGEEVGILTEKLGLQETENLHLKGLVEKLDKELHEVTNLSDQLNNQLSVGKDLLSQKEKDLSEAKQKLKTAQDLTAELFGTVEELKRECEKSEVLRENSEKQILELSE* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0383 158 Coils Coil 132 158 - -
Vvi19g0383 158 Coils Coil 104 124 - -
Vvi19g0383 158 Coils Coil 72 96 - -
Vvi19g0383 158 SUPERFAMILY Spectrin repeat 44 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0383 Vvi-Chr19 4210025 4210501 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0383 - - vri:117914857 283.878