Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0380 ATGAGAGGAGATACTGCTGATCTGTTAAGGACATTGAATAGCAAGCTGGACAAGAAATACTTGATTATATTGGACGATGTTTGGGGAGCCGATGAAGGGTTGTGGTGGGAAAGCTTGAAGTCAGGTTTTCCTCACAGAGCTGGTAGCTGTGTCATTGTCACGACAAGGGATGAGGAAGTAGCTAGATCAATGGGTGCCACCCACAGATGCATACATCATCTCAGACTCCTCTCAGAGGAGAATGGCTGGTCACTGTTCTCTAAAGTGGTCTTTGAAAGAGATGGGGGTCAATGCCCAAATATGGATTTGGAGGTTATTGGAAAGGAGATAGTTTCCCAATGCAGGGGTCTTCCCCTGGCAATTAAGATTGCTGGGGGAATGATGGTGGGTAAAGAAAAAAGTGCCCACAAATGGAGTCAAATATCAAAGCATCTAAAACAAGAGTTGGCTACTCATAATAAAAATAAGGTGATTTTCTCCACACTTAGTTTGAGCTATGAGGAGTTGCCTACACATTTGAAACCTTGCTTTCTGTCCTTTGCCATGTTTCCTGAGGACACTGAAATTTTTGTGCATACAATGATACATTGGTGA 594 0.431 MRGDTADLLRTLNSKLDKKYLIILDDVWGADEGLWWESLKSGFPHRAGSCVIVTTRDEEVARSMGATHRCIHHLRLLSEENGWSLFSKVVFERDGGQCPNMDLEVIGKEIVSQCRGLPLAIKIAGGMMVGKEKSAHKWSQISKHLKQELATHNKNKVIFSTLSLSYEELPTHLKPCFLSFAMFPEDTEIFVHTMIHW* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0380 197 Pfam NB-ARC domain 10 168 IPR002182 GO:0043531
Vvi19g0380 197 PRINTS Disease resistance protein signature 14 28 - -
Vvi19g0380 197 PRINTS Disease resistance protein signature 114 128 - -
Vvi19g0380 197 Gene3D - 2 73 IPR027417 -
Vvi19g0380 197 PANTHER DISEASE RESISTANCE PROTEIN RP 11 197 IPR044974 GO:0006952
Vvi19g0380 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 178 IPR027417 -
Vvi19g0380 197 Gene3D - 76 170 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0380 Vvi-Chr19 4190151 4190744 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0380 - - vri:117908686 403.29