Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0375 ATGATTCTAATGTTTGAGAATCCAGGTCAGCTAGAAGCCTTTAACAAACTGAAGGCAGAAAAGAAAGCAGAGGGGAAAGAAGTATCTGGTGATGAAATCTTTCGTCCAAGGGTGCCTCTTGAAGCTTGCCTAGCAAGCTTTTCAGCTCCAGAGGAGGTTCATGGTTTTTACAGCACTGCCTTGAAGACTAAAACAACCGCAGTCAAGTATGTCTACATAGATGTTCCTGATATCATTGATATTAGTCACATGCGTAGCAGGGGCATTCAGCCTGGGGAAGAGCTATTACCAGAGGCTGTTGATGAGGGTAAGGTGGAGTCAGAAAAGCTCTTGGCCAATGAGGAGATAGTTGCTCAACTTGTGTCAATGGGATTTAACCATCTTCATTGCCAGAAAGCTGCTATTAACACGTCTAATGCTGGAGTGGAAGAGGCGATAATTGGTTGCTATCACACATGGATGATCCAGATATAG 474 0.4388 MILMFENPGQLEAFNKLKAEKKAEGKEVSGDEIFRPRVPLEACLASFSAPEEVHGFYSTALKTKTTAVKYVYIDVPDIIDISHMRSRGIQPGEELLPEAVDEGKVESEKLLANEEIVAQLVSMGFNHLHCQKAAINTSNAGVEEAIIGCYHTWMIQI* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0375 157 Gene3D - 112 146 - -
Vvi19g0375 157 Pfam UBA/TS-N domain 113 146 IPR015940 -
Vvi19g0375 157 SUPERFAMILY UBA-like 87 146 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0375 Vvi-Chr19 4092388 4097558 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0375 K11836 - vvi:100264052 238.039