Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0363 ATGGACAATTCCAAATCTGAGAACATTTTGAAAGATTTTTATATTCCAAATTACATACTTCTTCCAGAATCAGAGGTTAGAAATGCTTCCCATATACCTTCCAGCCCTGTGTTAGTATTCATCAACTCCAAAAGTGGTGGTCAGCTAGGTGGGGAACTTCTTTGTACATATGGTGCACTTCTTAATAAAAACCAGGTTTTTGATTTGGACAATGAGGCTCCTGATAAGGTTCTACATCAGTTTTATTCCAATCTAGAAAAGCTCAAGCACAGTGGAGATATTTTGGCCTCTGAAATTCAGAACAGATTGAAAATAATAGTTGCAGGTGGGGATGGTACAGCGAACTGGCTCCTTGGAGTAGTTTCTGATCTCAAATTACCTCAGCCACCGCCTATTGCTACAGTGCCATTGGGAACAGGAAACAACATCCCATTTTCATTTGGATGGGGAAAGAAAAATCCTGGCTCAGATCGTCAATCTGTGGAGTCATTCCTGGATCAAGTGAGAACTGCAAGGGAAATGAAGATTGACAGTTGGTATATTACCTTGAGAATGAGACCTCCTGAAGAAGGTTCTTATGACCCAACTCTTGAGCTACCCCATTCTTTGCATGCATCTCAGCATGTCTACCCAACAAAAAAACTGAACATGGAGGGATGCTGCACATTTCAGGGTGGCTTTTGGAACTATTTCAGCGTGGGAATGGATGCTCGAGTATCATATGCATTTCATTCCGAGCGAAAGTTACATCCGGAAAAATTTAAACACCAGTTAGTTAATCAGAGCATTTATGCAAAGCTTGCATGTAAAGAAGGATTGTTTTGCACTTCTCTGCTTTATCCTTCTTCTTGGAATATAGCAAAACTAACAAAGGTCAGAATCATGAAAAAACAAGGTCAATGGGAAGACCTCCCAATACCTTGCAGCATCCGGTCGATTATTTGCCTCAATTTGCCCAGTTTTTCTGGTGGACTCAATCCCTGGGGGATGCCAAGTAGGAAGGCCTTGCATAATAGGGATTTCACTCCTCTATTTGTAGATGATGGCATTATTGAGGTTGTTGGTTTTAGAGATGCCTGGCATGGACTTTGTTTGTATGTTCCAAGGGGACATGGAACTCGTCTCGCACAGGTAAAGGGAATCCGTTTCGAGTTTCACAATAGTGCAGCTAACCATGTGTTCATGAGAATTGATGGCGAACCATGGAAACAGCCCCTCCCAGTGGATGATAACCCTGTGGTTGTAGAAATCTCTCACCTTGGCCAAGTAACTGTGCTTGCCACTCCACATTGCCGATCCACAAGTATCCCTGAGTCCTCTTCACTTGTCAGTCACCGGGACATAGAAGAAGACAGTAGAGAGACAGAAGACTCAGACATGCCAAGAAAGTTTGGTGCGGCTGATAAATTCAGAATGTCTGACGACCACTTGATGCCTTAA 1440 0.4271 MDNSKSENILKDFYIPNYILLPESEVRNASHIPSSPVLVFINSKSGGQLGGELLCTYGALLNKNQVFDLDNEAPDKVLHQFYSNLEKLKHSGDILASEIQNRLKIIVAGGDGTANWLLGVVSDLKLPQPPPIATVPLGTGNNIPFSFGWGKKNPGSDRQSVESFLDQVRTAREMKIDSWYITLRMRPPEEGSYDPTLELPHSLHASQHVYPTKKLNMEGCCTFQGGFWNYFSVGMDARVSYAFHSERKLHPEKFKHQLVNQSIYAKLACKEGLFCTSLLYPSSWNIAKLTKVRIMKKQGQWEDLPIPCSIRSIICLNLPSFSGGLNPWGMPSRKALHNRDFTPLFVDDGIIEVVGFRDAWHGLCLYVPRGHGTRLAQVKGIRFEFHNSAANHVFMRIDGEPWKQPLPVDDNPVVVEISHLGQVTVLATPHCRSTSIPESSSLVSHRDIEEDSRETEDSDMPRKFGAADKFRMSDDHLMP* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0363 479 Gene3D - 34 182 IPR017438 -
Vvi19g0363 479 Gene3D - 226 409 - -
Vvi19g0363 479 SMART dagk_c4b_2 229 401 IPR000756 GO:0004143|GO:0007205
Vvi19g0363 479 Pfam Diacylglycerol kinase accessory domain 227 401 IPR000756 GO:0004143|GO:0007205
Vvi19g0363 479 MobiDBLite consensus disorder prediction 443 479 - -
Vvi19g0363 479 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 32 185 IPR001206 GO:0016301
Vvi19g0363 479 SMART dagk_c4a_7 36 179 IPR001206 GO:0016301
Vvi19g0363 479 MobiDBLite consensus disorder prediction 432 479 - -
Vvi19g0363 479 FunFam Diacylglycerol kinase 35 178 - -
Vvi19g0363 479 Pfam Diacylglycerol kinase catalytic domain 36 170 IPR001206 GO:0016301
Vvi19g0363 479 PANTHER DIACYLGLYCEROL KINASE 30 431 IPR037607 GO:0004143|GO:0007165
Vvi19g0363 479 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 35 408 IPR016064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0363 Vvi-Chr19 3867743 3891159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0363 8 475 Acyl Lipid Metabolism Gene Families AT2G20900 65.344 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0363 K00901 - vvi:100265853 994.956