Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0361 ATGTTGGTTGCTGGAACTATTAAATATGCTGAGCGGACGCGTGCTTTGTATCTAGCTTGCTTGGGTAATTTCAAGGAGTCTATGCTTCCACCTCCAGACGCTGGACCAAACTATGCTCAACTTATGGAGGAATACTCCTCAAAGAAAGAGGCCCATGTTCCAGTAAAAATTATAATAGCACCAGAGAAAAGAGCCAGCACTTCTGCTTCCTCAGTTCCAGAAGAACCATCTACTGGACCTAATCACATCTCAGAAATGGAAAGTGGGTACAAGTTTTTTAAAATTTTCAAGGGACTCATTGTTGACCTCATGTTTAGCTTCCAAGAGCGCAATGACAGTCGAAAATTCTTCTTTGGAATGTTGCCAGAAAAGGCTTTTCGAGTGATAGAAGTTGAGCTCAATTTCATGTATGATGCACTCTACACCAAGATGGCAGTGGTGAATCGTAAGATTGGCTACTTTTTCCGTTTCATTTGCACAGGATGCATAGCAGTTGCCTTGCAGCTCTTTGCATCTCATCATAAGCACAAAATTCACAAGTTTGACATAGGTGTTACTTATGCTTTGCTTATTGGTGCAATTGGCCTGGATGTTATAGCTATCGTCAAGCTCATTTTCTCTGACTGGACTATAGTTTTACTGAAAAATTCTACTGCAAAAAGATGGATCTATTATGCACGTGAAAAACTCTTTTTTTACAAACTATGGGAGCCATCTAAATCTTTTTTTGACAGAAGGTGGTCTAATTCTATCTCACAGCACGGTTTGATACGTTACTGCCTGAGGGAAAGGTTCAAATGGTTCGACAAATTAGCAGACATTTGCGGACTTAAGGATCTTCTGGATGAGATTCAGTACAAGAAAACTGTGACTGTCGAGGAAAAACTAAAGGAATTCATCTTCAAAGAGCTAAAGGAGAAGGCTAAAAGTTCAGAGCAGCTAGAGGAGAAGGCTAAAAGTGCAGAGGAGAAGGCTAGACGTGCAGAGCAGTCAAGAATTGCCAAGGAGATATGTTCAGGAAGGGGCGATTGGATTCTGTCACAGAATGCTTGCCACTCCCTTCTATGGAGTGTTGAGAAAGAATACGATGAATGCCTTTTAATGTGGCATATTGCTACTGACCTCTGCCATTACAAAGAGCAAGAGGAAAAAGAAAAACCTGATGATGTACAAGAAGAAGAACTTCGTCGTCTTGATCGTCAGTTGTGTATCTGCCTGTCAGAATACATGTTATATCTTCTGGTCATGAGGCCCACAATGATGTCTGCTGTGGCAGGTATCGGGCAAATTAGGTTTCGAGACACCTGTGCGGAAGCAAAGAAGTTTTTTCGCAGAGGACAACAAGAACCCAACTGTTTTAAGAAGTTCTGCAAGCAACTTAAGAAGCTTCTTCGCATAGGACAATCAAAATCAATGGAAGATCAGATATCAGAGTACTGTGAACAGCTACTTTCAGTAGATACTGTTGTTAACCCCATTGAAGTTAAAGGAGATAGAAGCAAATCAGTCTTGTTTGATGCGTGTATGCTTGCAAAAGATCTCAGAAAATTGAACAAAACGAAGAGGTGGAAGATAATGAGCAAAGTCTGGGTGGAATTGTTGTCTTACGCTGCAAGTCATTGCAGAGCAAATACCCATGCCCAGCAGCTCAGCAAGGGTGGAGAGCTTATTACTTTTGTTTGGTTACTAATGGCCCATTTTGGCTTGGGAGAACAGTTCCGAATTCAGGAGGGCCATGCTAGAGCAAAGCTAATTGTAACCAAGTAA 1767 0.4143 MLVAGTIKYAERTRALYLACLGNFKESMLPPPDAGPNYAQLMEEYSSKKEAHVPVKIIIAPEKRASTSASSVPEEPSTGPNHISEMESGYKFFKIFKGLIVDLMFSFQERNDSRKFFFGMLPEKAFRVIEVELNFMYDALYTKMAVVNRKIGYFFRFICTGCIAVALQLFASHHKHKIHKFDIGVTYALLIGAIGLDVIAIVKLIFSDWTIVLLKNSTAKRWIYYAREKLFFYKLWEPSKSFFDRRWSNSISQHGLIRYCLRERFKWFDKLADICGLKDLLDEIQYKKTVTVEEKLKEFIFKELKEKAKSSEQLEEKAKSAEEKARRAEQSRIAKEICSGRGDWILSQNACHSLLWSVEKEYDECLLMWHIATDLCHYKEQEEKEKPDDVQEEELRRLDRQLCICLSEYMLYLLVMRPTMMSAVAGIGQIRFRDTCAEAKKFFRRGQQEPNCFKKFCKQLKKLLRIGQSKSMEDQISEYCEQLLSVDTVVNPIEVKGDRSKSVLFDACMLAKDLRKLNKTKRWKIMSKVWVELLSYAASHCRANTHAQQLSKGGELITFVWLLMAHFGLGEQFRIQEGHARAKLIVTK* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0361 588 Pfam Protein of unknown function, DUF594 518 569 IPR007658 -
Vvi19g0361 588 Coils Coil 301 331 - -
Vvi19g0361 588 Pfam Domain of unknown function (DUF4220) 1 259 IPR025315 -
Vvi19g0361 588 PANTHER OS01G0798800 PROTEIN-RELATED 1 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0361 Vvi-Chr19 3859834 3861600 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0361 - - vvi:100255568 1117.06