Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0358 ATGGGAATCGCCGACCGCCGCAAGCCGTCATCGGAGGGGAAGCTCTGGCGGCTCTGTCCGTTTTGGCAATCAGGGAACGGTTCGCCGTCGTCGTCGTCGACTCAAAACTTTCAGCAGCATAAAATCAGGGGCCGCCGCCACGTGGACGACACGGATACGCGGTCGTCTCCGAGCAAGGTCTCGTCGGTGGCGAGATCATTTCTTCCAACTCGCCGGAGGCTCAGGCTTGATCCGGCGAACAATCTCTACTTTCCTTATGAACCTGGAAAACAGGTCAAGAGCGCCGTCAGGATGAAAAACACTAGCAGGTCTCACGTAGCCTTCAAGTTCCAAACTACCGCACCTAAGAGCTGTTACATGCGCCCTCCTGGCGGCATTCTTGCTCCTGGGGAAAGCATTATTGCAACTGTTTTCAAGTTCATGGAGCATCCTGAGAACAATGAGAAAAATGAGAAACAACTTGATCAGAAGAGCAATGTTAAGTTTAAGATAATGAGCTTGAAGGTGAAAGCAGGAATGGACTATGTACCTGAACTGTTTGATGAGCAAAAGGAGAAAGTATCTGTTGAGCGAATTTTGCATGTTGTCTTCTTAGATGTGGAGCGCCCTAGTCCTGCATTAGAAAAACTAAAGCGTCAGTTGGCTGAAGCTGAGGCTGCGGTTGAAGCACGCAAGAAACCTCCACCAGAGATAGGCCCCCGTGTTATTGGTGAAGGTCTAGTCATAGATGAATGGAAAGAGCGCAGAGAGAAATATCTGGCTCAGCAACAGGTTGAAGCTGTAGACTCGGTGTAA 795 0.4994 MGIADRRKPSSEGKLWRLCPFWQSGNGSPSSSSTQNFQQHKIRGRRHVDDTDTRSSPSKVSSVARSFLPTRRRLRLDPANNLYFPYEPGKQVKSAVRMKNTSRSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFMEHPENNEKNEKQLDQKSNVKFKIMSLKVKAGMDYVPELFDEQKEKVSVERILHVVFLDVERPSPALEKLKRQLAEAEAAVEARKKPPPEIGPRVIGEGLVIDEWKERREKYLAQQQVEAVDSV* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0358 264 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 72 258 IPR016763 GO:0005789
Vvi19g0358 264 Gene3D Immunoglobulins 69 200 IPR013783 -
Vvi19g0358 264 ProSiteProfiles Major sperm protein (MSP) domain profile. 73 198 IPR000535 -
Vvi19g0358 264 Pfam MSP (Major sperm protein) domain 74 187 IPR000535 -
Vvi19g0358 264 MobiDBLite consensus disorder prediction 24 39 - -
Vvi19g0358 264 MobiDBLite consensus disorder prediction 24 65 - -
Vvi19g0358 264 SUPERFAMILY PapD-like 61 208 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0358 Vvi-Chr19 3851624 3854741 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0358 - - vvi:100243498 507.294